DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG5439 and Snx20

DIOPT Version :9

Sequence 1:NP_609607.1 Gene:CG5439 / 34710 FlyBaseID:FBgn0032476 Length:520 Species:Drosophila melanogaster
Sequence 2:NP_001020170.1 Gene:Snx20 / 307742 RGDID:1307787 Length:313 Species:Rattus norvegicus


Alignment Length:78 Identity:26/78 - (33%)
Similarity:41/78 - (52%) Gaps:13/78 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly   442 RRYSEFYKLHKSLLKTH-PVVSAVEFPPKKHFGNMNLVFVEERRQQLQIYLLNL----------- 494
            ||||:|.:|.::|||.. |.:..|.||.|:..||::...:.|||.:|:.||..|           
  Rat   112 RRYSDFERLQRALLKRFGPELEDVTFPRKRLTGNLSAETICERRLELREYLRLLYAVRAVRRSRE 176

  Fly   495 -VETLPQVEACKS 506
             .:.|.:.|.|::
  Rat   177 FADFLTRPELCEA 189

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG5439NP_609607.1 RUN 64..206 CDD:280855
PX_RUN 404..520 CDD:132810 26/78 (33%)
Snx20NP_001020170.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..61
PX_domain 73..186 CDD:295365 24/73 (33%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG2101
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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