Protein Alignment CG5439 and Rundc3a

DIOPT Version :9

• Sequence 1: NP_609607.1
• Gene: CG5439 / 34710
• FlyBaseID: FBgn0032476
• Length: 520
• Species: Drosophila melanogaster
• Sequence 2: NP_942053.2
• Gene: Rundc3a / 303569
• RGDID: 735057
• Length: 454
• Species: Rattus norvegicus
• Alignment Length: 452
• Identity: 97/452 - (21%)
• Similarity: 166/452 - (36%)
• Gaps: 123/452 - (27%)

  Fly    46 SQKFSGKELATERDESVQELCESLEELMSYGLRQSAGTSSFSAASFIQNMQEMVS---------G 101
            |:|.|.:.:..||...:.....|::.|:.....:....||....:|...:::::|         |
  Rat    16 SKKASSRNVIVERRNLITVCRFSVKTLLEKYTAEPIDDSSEEFVNFAAILEQILSHRFKACAPAG 80

  Fly   102 NAGGGSNNNDATFWEF-----------CQTHLTPHERQRYMDLKQIWTNVGRGRAFIRATLNEKR 155
            .....|::....||::           |.:.:.        :::.|.|...:|||:||..|.|||
  Rat    81 PVSWFSSDGQRGFWDYIRLACSKVPNNCVSSIE--------NMENISTARAKGRAWIRVALMEKR 137

  Fly   156 LHSHVLTWLSDEEQLHRFYTPWSLLLNDEAA------------------------KKLPEIVDSL 196
            :..::.|.|.|.....|||...:::|.:||.                        .|.|.::|..
  Rat   138 MSEYITTALRDNRTTRRFYDSGAIMLREEATVLTGMLIGLSAIDFSFCLKGEVLDGKTPVVIDYT 202

  Fly   197 SDVLFALN----VDTTELNAPRRSTPSVAVKEEPIIFTTSPVPVVGRQK---RPGIAVERPIECV 254
            ..:.|..:    .|..|.::...||......|.|.:      |:|..:.   .....:|:....|
  Rat   203 PYLKFTQSYDYLTDEEERHSAESSTSEDNSPEHPYL------PLVTDEDSWYNKWHKMEQKFRIV 261

  Fly   255 SSTEDLLGAL-----KPIESVEVQQILSKESIEQELAQPQEEVNLGPFDPIEPELE----FLKTP 310
            .:.:..|..|     ..::.:|.:....:..:|:..||.|.|         :.|||    .|:..
  Rat   262 YAQKGYLEELVRLRESQLKDLEAENRRLQLQLEEAAAQNQRE---------KRELEGVILELQEQ 317

  Fly   311 LPD----------IGAHV----GESELYEDRSDTSSQWSKSSSSANCLANSQQQAALEEHVNQLN 361
            |||          .|.|.    |..||   .:...:||...|:.      |:.:.|..   ::|.
  Rat   318 LPDPPPPPRTGLIPGDHAPLAQGSKEL---TTALVNQWPSLSTL------SRPEGASN---SKLF 370

  Fly   362 ERCALLETR--VAELSLQNRLLIRRL--TKQFEE----TGIDPSSS---LCSNFLITIPHVK 412
            .|.:.:.|.  .||.||.:.  .:||  .|:.||    .|.||:.|   ||.: |.:||..|
  Rat   371 RRHSFMSTEPLSAEASLSSD--SQRLGEGKRDEEPWGPIGKDPTPSMLGLCGS-LASIPSCK 429

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
CG5439	NP_609607.1	RUN	64..206	CDD:280855	35/189 (19%)
		PX_RUN	404..520	CDD:132810	4/9 (44%)
Rundc3a	NP_942053.2	RUN	60..186	CDD:397055	27/133 (20%)
		UPF0242	<238..>318	CDD:399636	16/94 (17%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	1	0.900	-	-		E1_KOG4381
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	1	0.900