DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG5439 and Snx22

DIOPT Version :9

Sequence 1:NP_609607.1 Gene:CG5439 / 34710 FlyBaseID:FBgn0032476 Length:520 Species:Drosophila melanogaster
Sequence 2:NP_001100302.2 Gene:Snx22 / 300796 RGDID:1305042 Length:194 Species:Rattus norvegicus


Alignment Length:82 Identity:29/82 - (35%)
Similarity:44/82 - (53%) Gaps:9/82 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly   422 HYTYEVHITMRQRLEHWTFFRRYSEFYKLHKSLLKTHPVVSAVEFPPKKHFGNMNLVFVEERRQQ 486
            |..::|.:....| .| |..||||||:.|||.:.|.:.|   .:||.|: ..|.....:|:|||.
  Rat    24 HMVFQVEVLYSGR-RH-TVPRRYSEFHALHKRIKKRYKV---PDFPSKR-LPNWRTRGLEQRRQG 82

  Fly   487 LQIYL---LNLVETLPQ 500
            |:.|:   |.|.:.:|:
  Rat    83 LETYIQGVLYLNQDVPK 99

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG5439NP_609607.1 RUN 64..206 CDD:280855
PX_RUN 404..520 CDD:132810 29/82 (35%)
Snx22NP_001100302.2 None
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG2101
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

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