DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG5439 and Rufy1

DIOPT Version :9

Sequence 1:NP_609607.1 Gene:CG5439 / 34710 FlyBaseID:FBgn0032476 Length:520 Species:Drosophila melanogaster
Sequence 2:NP_766145.1 Gene:Rufy1 / 216724 MGIID:2429762 Length:712 Species:Mus musculus


Alignment Length:546 Identity:97/546 - (17%)
Similarity:189/546 - (34%) Gaps:151/546 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 NASSSMPTEAGFRSMRSQLAGSTFGQRREDIFRRLQESAH-----KISQKF---SGKELATERDE 60
            :..|::...||...      |...|:|.....:.::|.|:     |:|.|.   |...|....|.
Mouse    86 SCGSALRAAAGLGD------GGGGGERAASKGQMMEERANLMHMMKLSIKVLLQSALSLGRSLDA 144

  Fly    61 S---VQELCESLEELMSYGLRQ-----SAGTSSFSAASFIQNMQEMVSGNAGGGSNNNDATFWEF 117
            .   :|:....:|..:.:||:.     ....|.|.....::.:....|..|....|         
Mouse   145 DYAPLQQFFVVMEHCLKHGLKVKKSFIGQNKSFFGPLELVEKLCPEASDIATSVRN--------- 200

  Fly   118 CQTHLTPHERQRYMDLKQIWTNVGRGRAFIRATLNEKRLHSHVLTWLSDEEQLHRFYTPWSLLLN 182
                           |.::.|.||||||::...|.:|:|..::...:.:::.|..||.|.:|::.
Mouse   201 ---------------LPELKTAVGRGRAWLYLALMQKKLADYLKVLIDNKQLLSEFYEPEALMME 250

  Fly   183 DEAAKKLPEIVDSLSDVLFALNVDTTELNAPRRSTPSVAVKEEPIIFTTSPVPVVGRQKRPGIAV 247
            :|..            |:..|.|....|:|      ::.:|.|.:   .|.|.|:....      
Mouse   251 EEGM------------VIVGLLVGLNVLDA------NLCLKGEDL---DSQVGVIDFSL------ 288

  Fly   248 ERPIECVSSTEDLLGALKPIESVEVQQILSKESIEQEL----------------------AQPQE 290
                 |:...:||....   |...:..:|.:::..:||                      ::.||
Mouse   289 -----CLKDAQDLDSGR---EHERITDVLDQKNYVEELNRHLSCTVGDLQTKIDGLEKTNSKLQE 345

  Fly   291 EVNLGP--FDPIEPELEFLKTPLPDIGAHVGESELYEDRSDTSSQWSKSSSSANCLANSQQQAAL 353
            |::...  ...::.|.:.|:.          ::|:..:||:.|.:.:|..:........|.:..|
Mouse   346 ELSAATDRICSLQKEQQQLRE----------QNEVIRERSEKSVEITKQDTKVELETYKQTRQGL 400

  Fly   354 EEHVNQLNERCALLETRVAELSLQNRLLIRRLTKQFEETGIDPSSSLCSNFLITIPHVKLAKTQR 418
            :|..:.:.::  |.|.:...|.|:..|.:        :.|:.....:....|            .
Mouse   401 DEMYSDVWKQ--LKEEKKVRLELEKELEL--------QIGMKTEMEIAMKLL------------E 443

  Fly   419 SGSHYTYEVHITMRQRLEHWTFFRRYSEFYKLHKSLLKTHPVVSAVEFPPKKHFGNMNLVFVEER 483
            ..:|...:..:.:||:||         |...::..:.  |.|.||.....:|   |..:...|.:
Mouse   444 KDTHEKQDTLVALRQQLE---------EVKAINLQMF--HKVQSAESSLQQK---NEAIASFEGK 494

  Fly   484 RQQLQIYLLNLVETLPQVEACKSKAE 509
            ..|:...:..:.|.|.|.|..:..||
Mouse   495 TTQVMSSMKQMEERLQQAERARQAAE 520

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG5439NP_609607.1 RUN 64..206 CDD:280855 27/146 (18%)
PX_RUN 404..520 CDD:132810 21/106 (20%)
Rufy1NP_766145.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..45
RUN 151..274 CDD:280855 30/164 (18%)
DUF3422 <444..589 CDD:295160 20/91 (22%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 498..532 6/23 (26%)
Interaction with RAB4. /evidence=ECO:0000269|PubMed:11172003 619..629
FYVE_RUFY1 638..708 CDD:277297
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG4381
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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