DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG5439 and Kif16b

DIOPT Version :9

Sequence 1:NP_609607.1 Gene:CG5439 / 34710 FlyBaseID:FBgn0032476 Length:520 Species:Drosophila melanogaster
Sequence 2:XP_036014693.1 Gene:Kif16b / 16558 MGIID:1098240 Length:1908 Species:Mus musculus


Alignment Length:435 Identity:90/435 - (20%)
Similarity:153/435 - (35%) Gaps:132/435 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly    12 EAGFRSMRSQLAGSTFGQRREDIFRRLQE-SAHKISQK----------------------FSGKE 53
            :.|....|.|...|.|..|.|  .|:||| ::|:.::|                      ...:.
Mouse   732 QQGLEQQRRQEEESLFRIREE--LRKLQELNSHEQAEKVQIFQELDRLHQEQNAQSAKLRLEKRR 794

  Fly    54 LATERDESVQELCESLEE----------LMSYGLRQSAGTSSFSAASFIQNMQEMVSGNAGGGSN 108
            |..|..|.||.:.. |||          |:..|..|.|........|..:.:.:.....|||...
Mouse   795 LEEEEKEQVQRVAH-LEEQLRKRQDTAPLLCPGEAQRAQEEKRELESIREALLQAKEMRAGGDHT 858

  Fly   109 NNDATFWEFCQTHLTPHERQRYMDLKQIWTNVGRGRAFIRATLNEKRLH-SHVL-------TWLS 165
            ..|..  |..|.:....:|::.:.|..:..::.:.:..:...:.|:::. .||.       ::|:
Mouse   859 CRDEL--ERAQQYFLEFKRRQLVKLASLEKDLVQQKDLLSKEVQEEKVALEHVKCDAGGDPSFLA 921

  Fly   166 DEE--------QLHRFYTPWSLL------LNDEAAKKLPEIVDSLSDVLFALN-----VDTTELN 211
            .::        .|.:..|..:.|      |.|.....||.:::....||.||:     :|||...
Mouse   922 TDDGNILGGPPDLDKIKTAETRLQSREHQLQDLLQNHLPALLEEKQRVLDALDSGVLGLDTTLCQ 986

  Fly   212 APRRSTPSVAVKEEPII-----------------FTTSPVPVVGRQKRPGIAVERPIECVSSTED 259
            ..:    .|..|||.|.                 ||.:    |.||:......|:.|        
Mouse   987 VEK----EVGEKEEQIAQYQANASQLQQLRATFEFTAN----VARQEEKVRRKEKEI-------- 1035

  Fly   260 LLGALKPIESVEVQQILSKESIEQELAQPQEEVNLGPFDPIEPELEFLKTPLPDIGAHVGESELY 324
                   :||.|.||   :|::||.:|                :||..::.|......  :.|:.
Mouse  1036 -------LESQEKQQ---REALEQAVA----------------KLEQRRSALQRCSTL--DLEIQ 1072

  Fly   325 EDR----SDTSSQWS--KSSSSANCLANSQQQAALEEHVNQLNER 363
            |.|    |..:|:||  ::|...:..|.....|.||..::||.::
Mouse  1073 EQRQKLGSLHTSEWSGWQASLETDGEALEMDPARLEHEIHQLKQK 1117

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG5439NP_609607.1 RUN 64..206 CDD:280855 31/178 (17%)
PX_RUN 404..520 CDD:132810
Kif16bXP_036014693.1 KISc_KIF1A_KIF1B 51..399 CDD:276816
Kinesin_assoc 398..510 CDD:406567
FHA 512..577 CDD:395400
SbcC <644..1081 CDD:223496 79/397 (20%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG2101
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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