DRSC - DRSC Integrative Ortholog Prediction Tool

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits

Protein Alignment Sfmbt and Samd13

DIOPT Version :9

Sequence 1:	NP_001137821.1	Gene:	Sfmbt / 34709	FlyBaseID:	FBgn0032475	Length:	1243	Species:	Drosophila melanogaster
Sequence 2:	NP_083420.2	Gene:	Samd13 / 75015	MGIID:	2686498	Length:	234	Species:	Mus musculus

Alignment Length:	278	Identity:	53/278 - (19%)
Similarity:	89/278 - (32%)	Gaps:	103/278 - (37%)

- Green bases have known domain annotations that are detailed below.

  Fly   967 LVN-HKLEGPPRVA---------HQQAPKPAPKPKIQRKRKPKKGAAGGKTPTDNNTQSVKSRTI 1021
            :|| :|:.|.||.|         ||.|.:..|                .|.|.|......|.:.:
Mouse     1 MVNYYKVLGVPRNASSSDIKRAFHQLALQVHP----------------DKNPGDKEAAEEKFKQV 49

  Fly  1022 ALKTTPHLPKLSIKLELKPEHHNAAFYENNQPEEEGDEEDPDADGDGDGSTSHISE--------- 1077
            |  ...|:    :....|.:.::.:.:..|:.|..|       ||...|.|..:::
Mouse    50 A--EAYHI----LSDAKKRKDYDRSRWNRNKGEIRG-------DGHDKGETIRVNDSRDETDWEE 101

  Fly  1078 -----------QSTTQSSSDLIAGSGSGSGSASLVTLATGSNKTVKKSTTKSPAPPT-----VGR 1126
                       |..|: ..||.:|....||.      .|||.:......|.:|...|     |..
Mouse   102 KICSRRPRHTFQKVTE-DEDLFSGDCLFSGP------ITGSRRASSPFFTVTPIMDTGFSTFVSH 159

  Fly  1127 KATSYIANSSATNNKYIPRLADIDSSEPHLELVPDTWNVYDVSQFLRVNDCTAHCDTFSRNKIDG 1191
            ::.||    |.....::|.::.                  .:.:|..|..|:        ..::|
Mouse   160 ESRSY----SDDPETFVPYISQ------------------GMGKFRLVTTCS--------KTVNG 194

  Fly  1192 KRLLQLTKDDIMPLLGMK 1209
            ||:  :||..:..:.|.|
Mouse   195 KRV--VTKRVVENIRGPK 210

Known Domains:

Indicated by green bases in alignment.

Gene	Sequence	Domain	Region	External ID	Identity
Sfmbt	NP_001137821.1	MBT	542..647	CDD:214723
		MBT	658..753	CDD:214723
		MBT	767..871	CDD:214723
		MBT	882..975	CDD:214723	3/8 (38%)
		TonB_N	<975..1040	CDD:292650	13/73 (18%)
		SAM_Scm-like-4MBT	1160..1226	CDD:188979	10/50 (20%)
		SAM	1160..1224	CDD:197735	10/50 (20%)
Samd13	NP_083420.2	DnaJ	2..>67	CDD:223560	18/86 (21%)
Samd13	NP_083420.2	DnaJ	3..66	CDD:278647	17/84 (20%)
Blue background indicates that the domain is not in the aligned region.

Information from Original Tools:

Tool	Simple Score	Weighted Score	Original Tool Information
Tool	Simple Score	Weighted Score	BLAST Result	Score	Score Type	Cluster ID
Compara	1	0.930	-	-		C167839853
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
Isobase	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	2	1.840