DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Sfmbt and l3mbtl2

DIOPT Version :9

Sequence 1:NP_001137821.1 Gene:Sfmbt / 34709 FlyBaseID:FBgn0032475 Length:1243 Species:Drosophila melanogaster
Sequence 2:NP_956326.1 Gene:l3mbtl2 / 568473 ZFINID:ZDB-GENE-030131-8713 Length:805 Species:Danio rerio


Alignment Length:791 Identity:271/791 - (34%)
Similarity:381/791 - (48%) Gaps:200/791 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly   326 DGMAVCKRCGAIGVKHTFYTKSRRFCSMACARGELYSLVLNTKMEGDQATTSSPDPGAGSESADL 390
            ||:..|:.|||:|...||:::::||||.:|:|.  ||  .|:|                      
Zfish   163 DGIVACEMCGAVGSIDTFFSRTKRFCSASCSRS--YS--SNSK---------------------- 201

  Fly   391 PGDQQQSQSDIELDLHAAHIKNANYRFRITDQS-----KITQLNSFGEPMSMGGDAAANNVQMAA 450
                   :|.|...|.....|.::::.....|:     |:.:.:....|.               
Zfish   202 -------KSSILARLQGRPSKKSSHKLCPKTQTEVLRPKVIEQHQESRPF--------------- 244

  Fly   451 DETIAALNGGAVGDATAPGSTEEGASTPNSYLSAAPTPKALRLFKDIYPQDDLPQIPKYERLPVP 515
                       |.|||..|                                              
Zfish   245 -----------VQDATLAG---------------------------------------------- 252

  Fly   516 CPQMEKIISIRRRMYDPTHSYDWLPRLSKENFNAAPVTCFPHAPGCEVWDNLGVGMKVEVENTDC 580
                                :||...|.|....||||:||.|.|.|..|:::.||:||||.||  
Zfish   253 --------------------FDWGSYLEKSGLLAAPVSCFRHVPLCAQWEDVYVGLKVEVLNT-- 295

  Fly   581 DSIEVIQPGQTPTSFWVATILEIKGYKALMSYEGF-DTDSHDFWVNLCNAEVHSVGWCATRGKPL 644
               ....|.:.   :|:||::::.|||||:.|||| |.|.||.|.||..|:||.:||||...|||
Zfish   296 ---HTALPSKV---YWIATVVQLAGYKALLRYEGFEDDDRHDLWCNLGTADVHPIGWCAVNNKPL 354

  Fly   645 IPPRTIEHKYKDWKDFLVGRLSGARTLPSNFYNKINDSLQSRFRLGLNLECVDKDRISQVRLATV 709
            :||:.:..  :|||.:|:.||.||.|:|.:|:.|:.|||:..||.|:.:|.||:.::|:.|||.|
Zfish   355 VPPQEVHQ--QDWKSYLMERLVGAHTIPVDFHVKMADSLRCPFRQGVRVEVVDRSQVSRTRLAVV 417

  Fly   710 TKIVGKRLFLRYFDSDDG--------FWCHEDSPIIHPVGWATTVGHNLAAPQDYLERMLAGREA 766
            ..::|.||.|.|.|:..|        ||||..||::|.|||:.||.|::......:.  :....|
Zfish   418 DTVIGGRLRLLYEDAGLGPSGEVLSDFWCHMQSPLVHHVGWSETVDHSIKETDTNVN--MGSHPA 480

  Fly   767 MIEVHEDDATIELFK-----MNFTFDEYYSDGKTNSFVEGMKLEAVDPLNLSSICPATVMAVLKF 826
            ...||::....:..|     |..||           |.||||:||:|||||.:||.|:|..||..
Zfish   481 FRRVHQNSVPDQFKKLRTVYMGATF-----------FKEGMKIEAIDPLNLGNICVASVRKVLLD 534

  Fly   827 GYMMIRIDSYQPDASGSDWFCYHEKSPCIFPAGFCSVNNISVTPPNGYDSRTFTWEGYLRDTGAV 891
            ||:|:.||..: ...||||||||..|..|.|.|:|..|:|.:|.|.|||..||||..||.:||||
Zfish   535 GYIMVGIDGVE-IGDGSDWFCYHASSHAILPVGYCENNDIPLTVPPGYDQATFTWPVYLEETGAV 598

  Fly   892 AAGQHLFHRIIPDHGFEVGMSLECADLMDPRLVCVATVARVVGRLLKVHFDGWTDEYDQWLDCES 956
            ||.|.||:.....|||..||.||..|||:|||||||||.|.|||||.:|||||..|:|||:||:|
Zfish   599 AAPQRLFNTDDVGHGFTSGMKLEAVDLMEPRLVCVATVRRCVGRLLLLHFDGWEPEFDQWVDCQS 663

  Fly   957 ADIYPVGWCVLVNHKL------EGPPRVAHQQAPKPAPKPKIQRKRK--PKKGAAGGKTPTDNNT 1013
            .:|||||||.:..::|      |.|....|..|.|.|...|.:|||:  .|......||.|:.||
Zfish   664 PEIYPVGWCEITGYQLQPPIGPEPPQGQEHSHASKKAKPFKGKRKRRFLRKNAKINLKTQTNENT 728

  Fly  1014 QSVKSR----------TIALKTTPHLPKLSIKLELK------------PEHHNAAF--YENNQPE 1054
            :.::|:          |:.:||.|....::::::::            .|.|..|.  ::..:.:
Zfish   729 EMIQSQEAANTSDKPSTLQIKTEPEEEVIAVRVKVEELETPILSSAQSKESHQGALTTFKREKDD 793

  Fly  1055 EEGDEEDPDAD 1065
            :|.:|||.|.|
Zfish   794 DEDEEEDEDDD 804

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SfmbtNP_001137821.1 MBT 542..647 CDD:214723 50/105 (48%)
MBT 658..753 CDD:214723 44/102 (43%)
MBT 767..871 CDD:214723 45/108 (42%)
MBT 882..975 CDD:214723 57/98 (58%)
TonB_N <975..1040 CDD:292650 20/88 (23%)
SAM_Scm-like-4MBT 1160..1226 CDD:188979
SAM 1160..1224 CDD:197735
l3mbtl2NP_956326.1 THAP 4..89 CDD:283206
MBT 257..357 CDD:214723 50/107 (47%)
MBT 366..467 CDD:214723 44/100 (44%)
MBT 511..582 CDD:280910 37/71 (52%)
MBT 591..682 CDD:214723 56/90 (62%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 109 1.000 Domainoid score I6286
eggNOG 1 0.900 - - E1_KOG3766
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 517 1.000 Inparanoid score I1245
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0002222
OrthoInspector 1 1.000 - - otm25420
orthoMCL 1 0.900 - - OOG6_105853
Panther 1 1.100 - - LDO PTHR12247
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R2614
SonicParanoid 1 1.000 - - X1465
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
ZFIN 00.000 Not matched by this tool.
1211.850

Return to query results.
Submit another query.