DRSC/TRiP Functional Genomics Resources

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Protein Alignment Sfmbt and l3mbtl1b

DIOPT Version :10

Sequence 1:NP_001137821.1 Gene:Sfmbt / 34709 FlyBaseID:FBgn0032475 Length:1243 Species:Drosophila melanogaster
Sequence 2:XP_688020.5 Gene:l3mbtl1b / 559572 ZFINID:ZDB-GENE-100922-38 Length:786 Species:Danio rerio


Alignment Length:1106 Identity:239/1106 - (21%)
Similarity:370/1106 - (33%) Gaps:405/1106 - (36%)


- Green bases have known domain annotations that are detailed below.


  Fly   199 MAQMPGSLG-VPGVEHDLLVPL--PDGLLHHKLLGTTLVPAMGTLNGN-------AFGNIMVSTE 253
            ||:...|.| ..|.:.|::..|  .||:              .||.|:       .||.:.:.||
Zfish     1 MAETSVSDGPATGGDFDMMSALDWKDGI--------------ATLPGSDIRFRMTEFGTLEIVTE 51

  Fly   254 ----------------------------NTSSKQMQRTYSTAKGANSTATTATCSASTSSALRSQ 290
                                        ||:|.|      |||..::|....:..|||       
Zfish    52 AEPKIKETELTDPQPKITGPINRHPPDLNTTSNQ------TAKIQSNTDHQTSTPAST------- 103

  Fly   291 RKTRKIEPVNRPG---LVLKTPIAYRGNIDPSVIPIQKDGMAVCKRCGAIGVKHTFYTKSRRFCS 352
                  ||..:.|   ..:..||.  ..:..:::|: .:....|:.||..|.:.:|.  ..:|||
Zfish   104 ------EPQRQAGGDSSTVDNPII--NTVPNAIVPV-TEAPINCRTCGLSGSRESFL--QGKFCS 157

  Fly   353 MACARGELYSLVLNTKMEGDQATTSSPDPGAGSESADLPGDQQQSQSDIELDLHAAHIKNANYRF 417
            .:|.:                     |..|..:.:....|::...                    
Zfish   158 ASCVQ---------------------PSSGRSTPAEAFEGERLGK-------------------- 181

  Fly   418 RITDQSKITQLNSFGEPMSMGGDAAANNVQMAADETIAALNGGAVGDATAPGSTEEGASTPNSYL 482
            |:..:.|:     |.|    ..|....|::                      ..||...:.....
Zfish   182 RVRKKKKM-----FME----SEDEEEENIE----------------------EEEERVKSSKGRR 215

  Fly   483 SAAPTPKALRLFKDIYPQDDLPQIPKYERLPVPCPQMEKIISIRRRMYDPTHSYDWLPRLSKENF 547
            :|    |..||                    |..|.::|            .::.|...|.:|..
Zfish   216 AA----KVARL--------------------VTAPLVKK------------KTWSWSVYLEEERA 244

  Fly   548 NAAPVTCF-PHAPGCEVWDNLGVGMKVEVENTDCDSIEVIQPGQTPTSFWVATILEIKGYKALMS 611
            .|||:..| .|....:..:...||||          :|.:.|.. |..|.|.|:.|::||:..:.
Zfish   245 AAAPLKLFKEHQSFPQSRNGFKVGMK----------LEGLDPCH-PALFCVLTVAEVQGYRIRLH 298

  Fly   612 YEGFDTDSHDFWVNLCNAEVHSVGWCATRGKPLIPPRTIEHKYKDWKDFLV---GRLSGARTLPS 673
            ::|: .:.:|||||..:.:|...|||......|:.|:.......:|..::.   |:|:     |.
Zfish   299 FDGY-PECYDFWVNADSWDVKPPGWCEKTSLKLLLPKGCRDGEFNWNTYVKNCRGQLA-----PK 357

  Fly   674 NFYNKINDSL-QSRFRLGLNLECVDKDRISQVRLATVTKIVGKRLFLRYFDSDD--GFWCHEDSP 735
            :.:..:|.|: .|.||.|:.||.||:..:|.:.:||:...|..||.:.....||  .:||...||
Zfish   358 HLFKSLNTSVTPSGFRAGMKLEAVDRKNLSDICVATIAAAVDNRLLIHIDHCDDTHDYWCDASSP 422

  Fly   736 IIHPVGWATTVGHNLAAPQDYLERMLAGREAMIEVHEDDATIELFKMNFTFDEYYSDGKTNSFVE 800
            .|||||:...|...|..|.:|  :.|.|                                     
Zfish   423 YIHPVGYCEEVKLTLTTPAEY--KHLKG------------------------------------- 448

  Fly   801 GMKLEAVDPLNLSSICPATVMAVLKFGYMMIRIDSYQPDASGSDWFCYHEKSPCIFPAGFCSVNN 865
                                                                             
Zfish   449 ----------------------------------------------------------------- 448

  Fly   866 ISVTPPNGYDSRTFTWEGYLRDTGAVAAGQHLFHRIIPDHGFEVGMSLECADLMDPRLVCVATVA 930
                         |:||.||.:||..||....|.: .|.|||:||:.||..|..:|.|:.|||::
Zfish   449 -------------FSWEKYLEETGTQAAPARAFKQ-RPPHGFQVGVKLEAVDKRNPMLIRVATIS 499

  Fly   931 RVVGRLLKVHFDGWTDEYDQWLDCESADIYPVGWCVLVNHKLEGPPRVAHQQAPKPAPKPKIQRK 995
            ......:|:|||||:||||.|||.:|.:::|||||....|.|:      |....:.:|.|..|  
Zfish   500 DTEEHRIKIHFDGWSDEYDYWLDADSPELHPVGWCQKTGHPLQ------HPNGTRDSPVPPGQ-- 556

  Fly   996 RKPKKGAAGGKTPTDNNTQSVKSRTIALKTT----PH----------LP-KLS----IKLELKPE 1041
                    |..||..|....::........|    |:          :| :||    :.:...|.
Zfish   557 --------GCPTPGCNGVGHIRGPRYGTHYTAVSCPYSDLNFNKDGLVPDRLSGERPVTISGPPR 613

  Fly  1042 HHNA-AFYENNQPEEEGD-EEDPDADGDGDGSTSHISEQSTTQSSSDLIAGSGSGSGSASLVTLA 1104
            |..| ...:.:||..... .|.||...|.......:.|...|.::.                   
Zfish   614 HRRAETLTQTHQPTSSASTPEPPDTTTDACPQARPVREHVVTAAAP------------------- 659

  Fly  1105 TGSNKTVKKSTTKSPAPPTVGRKATSYIANSSATNNKYIPRLADIDSSEPHLELVPDT------- 1162
                |.||....|....   |:.:.....:.|.......||..  ...|.|.:|:|:.       
Zfish   660 ----KCVKAPQVKQEGD---GKDSLQQFLHESVFCGWEQPRFQ--LCWEKHGKLLPEALGLTAKR 715

  Fly  1163 ---WNVYDVSQFLR-VNDCTAHCDTFSRNKIDGKRLLQLTKDDIMPLLGMKVGPALKISDLIAQL 1223
               ||..:|:.|:| :..|..|..||.:.:|||:..|.||:.||:.:|.:|:||||||.:.|..|
Zfish   716 VSKWNTEEVASFVRGLPGCREHAPTFRKEQIDGEAFLLLTQSDIVKILSIKLGPALKIYNSILML 780

  Fly  1224 K 1224
            |
Zfish   781 K 781

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SfmbtNP_001137821.1 MBT_dSfmbt_rpt1 564..672 CDD:439109 28/110 (25%)
MBT_dSfmbt_rpt2 674..753 CDD:439112 29/81 (36%)
MBT_dSfmbt_rpt3 798..904 CDD:439115 10/105 (10%)
MBT_dSfmbt_rpt4 905..976 CDD:439118 34/70 (49%)
SAM_Scm-like-4MBT 1160..1226 CDD:188979 29/76 (38%)
l3mbtl1bXP_688020.5 MBT 260..360 CDD:459242 29/116 (25%)
MBT 367..459 CDD:459242 36/208 (17%)
MBT_L3MBTL1-like_rpt3 472..544 CDD:439093 35/77 (45%)
zf-C2HC 558..586 CDD:460240 5/27 (19%)
SAM_Scm-like-3MBT3,4 716..781 CDD:188981 26/64 (41%)

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