DRSC/TRiP Functional Genomics Resources

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Protein Alignment Sfmbt and Phc2

DIOPT Version :9

Sequence 1:NP_001137821.1 Gene:Sfmbt / 34709 FlyBaseID:FBgn0032475 Length:1243 Species:Drosophila melanogaster
Sequence 2:NP_001182059.1 Gene:Phc2 / 54383 MGIID:1860454 Length:850 Species:Mus musculus


Alignment Length:318 Identity:73/318 - (22%)
Similarity:125/318 - (39%) Gaps:89/318 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly   967 LVNHKLEGPPRVAHQQAPKPAPKPKI-----QRKRKPKKGAAGGKTPTDNNTQSVKSRTIALKTT 1026
            ::.|.:||   ...|:..:|.|..:.     ..|:|..:|....|.|..::|.:..|.    ...
Mouse   560 ILTHVIEG---FVIQEGAEPFPVGRSSLLVGNLKKKYAQGFLPEKPPQQDHTTTTDSE----MEE 617

  Fly  1027 PHLPK-------LSIKLEL--------------------KPEHHNAA-------FYENNQPEEEG 1057
            |:|.:       |.:|.||                    ..:.:|..       |:.:....::.
Mouse   618 PYLQESKEEGTPLKLKCELCGRVDFAYKFKRSKRFCSMACAKRYNVGCTKRVGLFHSDRSKLQKA 682

  Fly  1058 DEEDPDADGDGDGSTSHISEQSTTQSSSDLIAGS-GSGSGSASL-VTLA-------TGSNKTVKK 1113
                        |:|:|...:::..|...|...: ...||:..| ||.|       ..|::....
Mouse   683 ------------GTTTHNRRRASKASLPTLTKDTKKQPSGTVPLSVTAALQLAHSQEDSSRCSDN 735

  Fly  1114 STTKSPAPPTVGRKATSYIANSSATNNKYIPRLADIDSSEPHL-ELV----------PDTWNVYD 1167
            |:.:.|..|         |:.||:|:.:...: .|:|..:.|: :||          |..|||.|
Mouse   736 SSYEEPLSP---------ISASSSTSRRRQGQ-RDLDLPDMHMRDLVGVGHHFLPSEPTKWNVED 790

  Fly  1168 VSQFLR-VNDCTAHCDTFSRNKIDGKRLLQLTKDDIMPLLGMKVGPALKISDLIAQLK 1224
            |.:|:| :..|....:.|...:|||:.||.|.:|.:|..:.:|:||||||...|:.||
Mouse   791 VYEFIRSLPGCQEIAEEFRAQEIDGQALLLLKEDHLMSAMNIKLGPALKIYARISMLK 848

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SfmbtNP_001137821.1 MBT 542..647 CDD:214723
MBT 658..753 CDD:214723
MBT 767..871 CDD:214723
MBT 882..975 CDD:214723 2/7 (29%)
TonB_N <975..1040 CDD:292650 16/96 (17%)
SAM_Scm-like-4MBT 1160..1226 CDD:188979 28/66 (42%)
SAM 1160..1224 CDD:197735 26/64 (41%)
Phc2NP_001182059.1 Disordered. /evidence=ECO:0000269|PubMed:27827373 1..79
Interaction with BMI1. /evidence=ECO:0000269|PubMed:27827373 33..56
PHA03247 <216..540 CDD:223021
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 233..314
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 335..386
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 402..436
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 528..553
HD1 550..579 5/21 (24%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 597..624 6/30 (20%)
PHC2_SAM_assoc 662..780 CDD:374673 26/139 (19%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 676..712 7/47 (15%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 725..764 10/48 (21%)
SAM_Ph1,2,3 781..849 CDD:188976 28/68 (41%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C167839868
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.840

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