DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Sfmbt and mbtd1

DIOPT Version :10

Sequence 1:NP_001137821.1 Gene:Sfmbt / 34709 FlyBaseID:FBgn0032475 Length:1243 Species:Drosophila melanogaster
Sequence 2:NP_001006742.1 Gene:mbtd1 / 448411 XenbaseID:XB-GENE-949653 Length:651 Species:Xenopus tropicalis


Alignment Length:762 Identity:275/762 - (36%)
Similarity:388/762 - (50%) Gaps:168/762 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly   249 MVSTENTSSKQMQRTYSTAKGANSTATTATCSASTSSALRSQRKTRKIEPVNRPGLVLKTPIAYR 313
            :....:.|.::.:.::....|.:|      ||..|||:..|.....::.|     |....|| .:
 Frog     7 LADLSSLSERKRRDSFGMFDGYDS------CSEDTSSSSSSDESEEEVAP-----LPSSLPI-IK 59

  Fly   314 GNIDPSVIPIQKDGMAVCKRCGAIGVKHTFYTKSRRFCSMACARGELYSLVLNTKMEGDQATTSS 378
            .|......|..|.|||.|:.||.:||:..||:|::||||::|:|.  ||  .|:|.....|....
 Frog    60 NNGQVYTYPDGKSGMATCEMCGMVGVRDAFYSKTKRFCSVSCSRS--YS--SNSKKASILARLQG 120

  Fly   379 PDPGAGSESADLPGDQQQSQSDIELDLHAAHIKNANYRFRITDQSKITQLNSFGEPMSMGGDAAA 443
            ..|                                      |.::|:.|    .:|:        
 Frog   121 KPP--------------------------------------TKKAKVLQ----KKPL-------- 135

  Fly   444 NNVQMAADETIAALNGGAVGDATAPGSTEEGASTPNSYLSAAPTPKALRLFKDIYPQDDLPQIPK 508
                      :|.|...|          :..|:..|..::.||.                     
 Frog   136 ----------VAKLAAYA----------QYKATLKNQSVNKAPV--------------------- 159

  Fly   509 YERLPVPCPQMEKIISIRRRMYDPTHSYDWLPRLSKENFNAAPVTCFPHAPGCEVWDNLGVGMKV 573
                                   ....:.|...::..|..|||||||.|||....|.::..|::|
 Frog   160 -----------------------TVEGFSWGNYITSNNTAAAPVTCFRHAPMGNCWGDIAEGVRV 201

  Fly   574 EVENTDCDSIEVIQPGQTPTS-FWVATILEIKGYKALMSYEGFDTDSH-DFWVNLCNAEVHSVGW 636
            ||.|||         ...||. ||::.|:::.|:.||:.||||:.||. |||.|:|..:||.|||
 Frog   202 EVPNTD---------SNLPTKVFWISGIVKLAGFNALLRYEGFENDSSLDFWCNICGPDVHPVGW 257

  Fly   637 CATRGKPLIPPRTIEHKYKDWKDFLVGRLSGARTLPSNFYNKINDSLQSRFRLGLNLECVDKDRI 701
            |||.||||:||:||:|||.:||.|||.||:||:|||.:|..|:::|:|..|:..:.:|.|||..:
 Frog   258 CATSGKPLVPPQTIQHKYTNWKAFLVKRLTGAKTLPPDFSQKVSESMQYPFKPSMRVEVVDKTHL 322

  Fly   702 SQVRLATVTKIVGKRLFLRYFDSD---DGFWCHEDSPIIHPVGWATTVGHNLAAPQDYLERMLAG 763
            .:.|:|.|..::|.||.|.|.:|:   |.||||..||:|||:||:.::||.... .|.|::..:.
 Frog   323 CRTRVAVVDSVIGGRLRLVYEESEDKTDDFWCHMYSPLIHPIGWSRSIGHRFKR-TDILKKQESN 386

  Fly   764 REA----MIEVHEDDATIELFKMNFTFDEYYSDGKTNSFVEGMKLEAVDPLNLSSICPATVMAVL 824
            .:|    ..:|.:.:...|.||                  |||||||:||||||:||.||:..||
 Frog   387 YDAPSHLFTKVKDIEQGSEWFK------------------EGMKLEAIDPLNLSAICVATIRKVL 433

  Fly   825 KFGYMMIRIDSYQPDASGSDWFCYHEKSPCIFPAGFCSVNNISVTPPNGYDSRTFTWEGYLRDTG 889
            ..||:||.||..:. |.||||||||..||.|||.|||.:|.|.:|||.||....|.|..|||:||
 Frog   434 ADGYLMIGIDGSEA-ADGSDWFCYHASSPSIFPVGFCEINKIELTPPRGYTKLPFKWFDYLRETG 497

  Fly   890 AVAAGQHLFHRIIPDHGFEVGMSLECADLMDPRLVCVATVARVVGRLLKVHFDGWTDEYDQWLDC 954
            ::||...||::.:|:|||.|||.||..|||:|||||||||.|::.|||::|||||.||||||:||
 Frog   498 SIAAPVKLFNKEVPNHGFRVGMKLEAVDLMEPRLVCVATVTRIIHRLLRIHFDGWEDEYDQWVDC 562

  Fly   955 ESADIYPVGWCVLVNHKLEGPPRVAHQQAPKPAPKPKIQRKRKPKKG 1001
            ||:|:||||||.|..::|:.|...:::.:.....|.|.:.|.:|.||
 Frog   563 ESSDLYPVGWCQLTGYQLQPPAPQSNKDSQSNISKQKKKSKSQPYKG 609

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SfmbtNP_001137821.1 MBT_dSfmbt_rpt1 564..672 CDD:439109 56/109 (51%)
MBT_dSfmbt_rpt2 674..753 CDD:439112 32/81 (40%)
MBT_dSfmbt_rpt3 798..904 CDD:439115 60/105 (57%)
MBT_dSfmbt_rpt4 905..976 CDD:439118 48/70 (69%)
SAM_Scm-like-4MBT 1160..1226 CDD:188979
mbtd1NP_001006742.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 21..55 10/44 (23%)
MBT 1 164..268 51/112 (46%)
MBT_MBTD1_rpt1 192..294 CDD:439110 57/110 (52%)
MBT 2 276..373 43/96 (45%)
MBT_MBTD1_rpt2 295..379 CDD:439113 32/84 (38%)
MBT 3 374..479 52/124 (42%)
MBT_MBTD1_rpt3 407..497 CDD:439116 56/108 (52%)
MBT 4 487..583 60/95 (63%)
MBT_MBTD1_rpt4 513..583 CDD:439119 48/69 (70%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 581..610 7/29 (24%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 629..651
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.