DRSC/TRiP Functional Genomics Resources

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Protein Alignment Sfmbt and l(3)mbt

DIOPT Version :9

Sequence 1:NP_001137821.1 Gene:Sfmbt / 34709 FlyBaseID:FBgn0032475 Length:1243 Species:Drosophila melanogaster
Sequence 2:NP_733209.1 Gene:l(3)mbt / 43288 FlyBaseID:FBgn0002441 Length:1477 Species:Drosophila melanogaster


Alignment Length:1221 Identity:249/1221 - (20%)
Similarity:409/1221 - (33%) Gaps:442/1221 - (36%)


- Green bases have known domain annotations that are detailed below.


  Fly   130 AMEAVVDDDDQVYGQRDNNFDDNGSELEPKQEIINIDDFVMMNEDNNSYDGTDFMTSSDKDISQS 194
            |:|.:..:|           ||...|.:.|.||                         .|...|:
  Fly   468 AIETITIED-----------DDESEEEQQKPEI-------------------------KKTPKQN 496

  Fly   195 SSSCMAQMPGSLGVPGVEHDLLVPLPDGLLHHKLLGTTLVPAMGTLNGNAFGNIMVSTENTSSKQ 259
                  |.|.....|..:.   :|:|            ::||          .|.:||.:|:.|:
  Fly   497 ------QKPEKQEAPKKKQ---IPMP------------ILPA----------GITISTTSTAKKK 530

  Fly   260 MQRTYSTAKGANSTATTATCSASTSSALRS-----QRKTRKIEPVNRPGLVLKTPIAYRGNIDPS 319
            ..|       .||:.||.:.|:|.||:...     .:||.| |....||:.:         |...
  Fly   531 AVR-------KNSSVTTISSSSSDSSSYSDVEVVPTKKTEK-ELSMLPGISI---------IKAE 578

  Fly   320 VIPIQKDGMAVCKRCGAIGVKHTFYTKSRRFCSMACARGELYSLVLNTKMEGDQATTSSP----- 379
            .:|:.::......||.. .|..| ..||    |.:.:.|...|.:.......|...:|.|     
  Fly   579 SLPLSREDFERSLRCDE-QVPQT-PPKS----SSSSSSGSHASEMSPPPKLADPKPSSPPAKNAK 637

  Fly   380 -------DPGAGSESADLPGDQQQSQSDIE-LDLHAAHIKNANYRFRITDQSKITQLNSFGEPMS 436
                   :|...|::.|......|:.:.:: .....|:::|:..||.: ::....|:|...:|..
  Fly   638 KANDHDANPSPSSKTNDFKKSMMQNLNMLKWRGQQPANLQNSTVRFEL-NEFNFLQINERCQPRQ 701

  Fly   437 MGGDAA---------------------------ANNVQMAADETIAALNGGAVG------DATAP 468
              |.||                           .|....|||  ..|.:..:||      ....|
  Fly   702 --GPAAYFERPLYDRPGRRPSACVHPLLYLCQRCNFHGPAAD--FLAPHFCSVGCVRRSQKRRLP 762

  Fly   469 GSTEEGASTPNSYL--SAAPTPKALRLFKDIYPQDDLPQIPKYERLPVPCPQMEKIIS-----IR 526
            .||::.:....:.|  :|...|             ||||..:....|      .|.:|     ::
  Fly   763 QSTQKESKISRTQLEQTAGTAP-------------DLPQKRQTNYKP------HKSLSAIQEQLQ 808

  Fly   527 RRMYD-PTHSYDWLPRL-SKENFNAAPV----TCFPHAPGCEVWDNLGVGMKVEVENTDCDSIEV 585
            :|..| |...:.|...| ||....|||:    ..||.:|.|     ..:|||          :|.
  Fly   809 QRQKDKPRKPFRWSEYLKSKGKDVAAPIHLFLNPFPISPNC-----FEIGMK----------LEA 858

  Fly   586 IQPGQTPTSFWVATILEIKGYKALMSYEGFDTDSHDFWVNLCNAEVHSVGWCATRGKPLIPPRTI 650
            |.| :..:.|.|.:|:|::||:..:|::|: :..:|||||..:.::...|||....:.|..|:..
  Fly   859 IDP-ENCSLFCVCSIVEVRGYRLKLSFDGY-SSMYDFWVNADSQDIFPPGWCDETARVLQAPKDY 921

  Fly   651 EHKYKDWKDFLVGRLSGARTLPSNFYNKINDSLQ----SRFRLGLNLECVDKDRISQVRLATVTK 711
            ..:...|..:||  .:|.:..|...:..:|...|    :.|.:|::||..|.:...::.:||||.
  Fly   922 NSERFSWSRYLV--KTGGKAAPRALFGHLNMQQQMDVRNGFAVGMHLEAEDLNDTGKICVATVTD 984

  Fly   712 IVGKRLFLRYFDSDDGF--WCHEDSPIIHPVGWATTVGHNLAAPQDYLERMLAGREAMIEVHEDD 774
            |:.:|:.:.:...||.:  |.|..||.|||.||     |.             ||:.:|      
  Fly   985 ILDERIRVHFDGWDDCYDLWVHITSPYIHPCGW-----HE-------------GRQQLI------ 1025

  Fly   775 ATIELFKMNFTFDEYYSDGKTNSFVEGMKLEAVDPLNLSSICPATVMAVLKFGYMMIRIDSYQPD 839
                                                                             
  Fly  1026 ----------------------------------------------------------------- 1025

  Fly   840 ASGSDWFCYHEKSPCIFPAGFCSVNNISVTPPNGYDSRTFTWEGYLRDTGAVAAGQHLFHRIIPD 904
                                         .||: |....|.|:.|:.:.|.:||.:.||....|.
  Fly  1026 -----------------------------VPPD-YQKSAFIWDDYISEVGGMAASKELFTPRQPM 1060

  Fly   905 HGFEVGMSLECADLMDPRLVCVATVARVVGRLLKVHFDGWTDEYDQWLDCESADIYPVGWCVLVN 969
            . ::..|.||..|..:|.|:..|||....|..:::|.|.|..||..||:.:|.|::|:|||...:
  Fly  1061 E-YQERMKLEVVDQRNPCLIRPATVVTRKGYRVQLHLDCWPTEYYFWLEDDSPDLHPIGWCEATS 1124

  Fly   970 HKLEGPP----------------------------------------------RVAHQQAPKPAP 988
            |:||.||                                              |....:.|:.||
  Fly  1125 HELETPPGYLQPKSVMPCDVEGCRGFGNAKRFNLNVHALRECCPYAPENWRQWRSKTVKPPRVAP 1189

  Fly   989 KPKIQR--KRKPKKGAAGGKTPTDNNTQSVKSRTIALKTTPHLPK-LSIKLELKPEHHNAAFYEN 1050
            : .|:|  .:|.|:..:..|       |::|..:......|.:.: :..|.:..|........:.
  Fly  1190 E-NIRRGWAKKTKRACSEAK-------QAIKEDSQQEIVYPKVAEVVQAKRKTSPCEEKVVKKQK 1246

  Fly  1051 NQPEEEGDEEDPDADGDGDGSTSHISEQSTTQSSSDLIAGSGSGSGSASLVTLATGSNKTVKKST 1115
            ...:||..|:.||             |:|.                             .:.:|.
  Fly  1247 QMQKEEDAEQVPD-------------ERSL-----------------------------AIARSF 1269

  Fly  1116 TKSPAPPTVGRKATSYIANSSATNNKYIPRLADIDSSEPHLELVPDTWNVYDVSQFL-RVNDCTA 1179
            .|...|        .::.|..........:|.|:.::..|       |..:||.::: |..|.|.
  Fly  1270 VKDYGP--------QFLPNYRLWQLNSAFKLDDVRTNPLH-------WTSWDVCEYIERALDSTD 1319

  Fly  1180 HCDTFSRNKIDGKRLLQLTKDDIMPLLGMKVGPALKISDLIAQLK----CK 1226
            .........|||:.||.|.:.::...|.:|||||:|:..||..|:    ||
  Fly  1320 IAKVIFEQDIDGRALLMLGRKELDTYLKLKVGPAVKLYSLILNLRIAVVCK 1370

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SfmbtNP_001137821.1 MBT 542..647 CDD:214723 33/109 (30%)
MBT 658..753 CDD:214723 29/100 (29%)
MBT 767..871 CDD:214723 1/103 (1%)
MBT 882..975 CDD:214723 33/92 (36%)
TonB_N <975..1040 CDD:292650 15/113 (13%)
SAM_Scm-like-4MBT 1160..1226 CDD:188979 22/70 (31%)
SAM 1160..1224 CDD:197735 21/64 (33%)
l(3)mbtNP_733209.1 MBT 822..918 CDD:214723 33/112 (29%)
MBT 929..1028 CDD:214723 32/218 (15%)
MBT 1038..1130 CDD:214723 33/92 (36%)
SAM_PNT 1279..1366 CDD:280377 26/93 (28%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45453494
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
21.840

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