DRSC/TRiP Functional Genomics Resources

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Protein Alignment Sfmbt and phc1

DIOPT Version :10

Sequence 1:NP_001137821.1 Gene:Sfmbt / 34709 FlyBaseID:FBgn0032475 Length:1243 Species:Drosophila melanogaster
Sequence 2:NP_991270.2 Gene:phc1 / 403008 ZFINID:ZDB-GENE-081022-39 Length:897 Species:Danio rerio


Alignment Length:622 Identity:132/622 - (21%)
Similarity:205/622 - (32%) Gaps:167/622 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly     7 RMMWMSSQYNSERITLEDAATLLGHPTVGLSVME---DLSAHQPT----LDMNPMMSLMGGDFTG 64
            :.:.:..|.||....|.:.|. :...|:..|...   :.||.|||    ..:|...:..||..|.
Zfish    56 QQLMLQQQINSATCQLHNLAA-VQQATLAASRQSSSPNNSASQPTSSAQCTVNLSTTSAGGTMTN 119

  Fly    65 Q----AAATAAALGVQPGTLIATNSNNLYGFAHM--------------------GGL-------- 97
            .    .|.:||:..:....|:..||.   |...|                    ||.        
Zfish   120 PRPIGPATSAASTALSQSVLLGGNSG---GQGQMYLRVNRSLRAPLTPQLIFMPGGTATATVATV 181

  Fly    98 -----QQQLLQQSAAAAVFQNYAEAMDND-VENGMVGMAMEAV-----------VDDDDQVYG-- 143
                 |||..||....|...:.:...||| |:|    :||..|           ..|..:..|  
Zfish   182 AQTQPQQQPQQQQQQEATPTSSSSQSDNDQVQN----LAMRCVSTPRAATVKTEFADRKETTGTF 242

  Fly   144 ------QRDNNFDDNGSELEPK-QEIINIDDFVMMNEDNNSYDGTDFMTSSDKDISQSSSSCMAQ 201
                  |....|..:..:::|: |.:.|.......|..|.|....:...::...::...:...:.
Zfish   243 PLNQQTQTPQQFGQSTQQVQPQTQPLANAKLQSFSNTANPSVPALNVKPNNQSAVAPQQAGASSN 307

  Fly   202 MPGSLGVP------------GVEHDLLVPLPDGLLHHKLLGTTLVPAMGTLNGNAFGNIMVSTEN 254
            .|.|...|            |:.....||.....:.|.|:.|:.||.  :..|...|.:...:..
Zfish   308 PPSSSPTPSLPLSQLLLSQSGLHQTRGVPASTATVTHILVPTSNVPT--STQGYPLGTVATKSNM 370

  Fly   255 TSS----KQMQRT---YSTAKGANSTATTATCSASTSSALRSQRKTRKIEPVNRPGLVLKTP--- 309
            |:.    :.:|:|   .||.|.|:.|.....    .....:..|...::.|.:.|.::...|   
Zfish   371 TAQTLVVQPLQQTGANLSTEKLAHGTGHVPI----QPKTAQGHRVPVQMSPRHPPPILPAPPNNG 431

  Fly   310 IAYRGNIDPSVIPIQKDGMAVCKRCGAIGVKHTFYTKSRRFCSMACARGELYSLVLNTKMEGDQA 374
            .|..| :.|..:|:|..|    .|...:|..........|.|   |::.: .:..:.....|:..
Zfish   432 QATAG-LHPPHVPVQLVG----ARQSTLGNSQALALAQARTC---CSQQD-GTAAVGVNNPGNVV 487

  Fly   375 T--TSSPDPGAG-----SESADLPGDQQQSQSDIELDLHAAHIKNANYRFRITDQSKI-TQLNSF 431
            |  |:....|||     ::|| ||..|.|                       |:||.: ||.|..
Zfish   488 TMVTAMDTSGAGMCLKTAQSA-LPISQMQ-----------------------TNQSAVLTQGNPA 528

  Fly   432 GEPMSMGGDAAANN------VQMAADE---TIAALNGGAVGDATAPGSTEEGASTPNSYLSAAPT 487
            ....||.|.   ||      ||.|..:   .|..:...:..|.|...|.|..:.:|:...||.|.
Zfish   529 SVTHSMDGQ---NNSGDSLFVQSAQAQIKPAIGPIKRKSESDLTHEISNEPISGSPSMQDSAPPL 590

  Fly   488 PKALRLFKDIYPQDDLPQI-----PKYE-RLPVPCPQ 518
            ..|..|       |.:|:|     |... .||||.|:
Zfish   591 SPAPSL-------DTVPEIAFSSPPTLSLSLPVPLPR 620

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SfmbtNP_001137821.1 MBT_dSfmbt_rpt1 564..672 CDD:439109
MBT_dSfmbt_rpt2 674..753 CDD:439112
MBT_dSfmbt_rpt3 798..904 CDD:439115
MBT_dSfmbt_rpt4 905..976 CDD:439118
SAM_Scm-like-4MBT 1160..1226 CDD:188979
phc1NP_991270.2 None
Blue background indicates that the domain is not in the aligned region.

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