DRSC/TRiP Functional Genomics Resources

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Protein Alignment Sfmbt and L3mbtl4

DIOPT Version :9

Sequence 1:NP_001137821.1 Gene:Sfmbt / 34709 FlyBaseID:FBgn0032475 Length:1243 Species:Drosophila melanogaster
Sequence 2:NP_796252.2 Gene:L3mbtl4 / 320858 MGIID:2444889 Length:621 Species:Mus musculus


Alignment Length:603 Identity:174/603 - (28%)
Similarity:270/603 - (44%) Gaps:86/603 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly   657 WKDFLVGRLSGARTLPSNFYNKINDSL---QSRFRLGLNLECVDKDRISQVRLATVTKIVGKRLF 718
            |:.:|  |...|...|...::| :.|.   ::.|::|:.||.:|..|.|...:.:|.::.|.||.
Mouse    54 WEQYL--REGNAVAAPVELFSK-DQSFPEHENGFQVGMRLEGIDARRPSVFCVLSVAEVCGYRLR 115

  Fly   719 LRYFDSDDG------FWCHEDSPIIHPVGWATTVGHNLAAPQDYLERMLAGREAMIEVHEDDATI 777
            |.:    ||      ||.:..||.||||||.....|.|..|:||.:......:.:......:|..
Mouse   116 LHF----DGYLSCYDFWTNAGSPDIHPVGWCQKTKHELHIPRDYRKDKFVWMDYLKACRLQNAPK 176

  Fly   778 ELFKMNFTFDEYYSDGKT-NSFVEGMKLEAVDPLNLSSICPATVMAVLKFGYMMIRIDSYQPDAS 841
            :||:      ...|:|.. ..|..||||||||..|...:|.||:..::: ..:.:..||..   .
Mouse   177 KLFR------NRSSNGPVPREFQVGMKLEAVDRRNPCLMCVATIADIVE-DRVRVHFDSLD---D 231

  Fly   842 GSDWFCYHEKSPCIFPAGFCSVNNISVTPPNGY-DSRTFTWEGYLRDTGAVAAGQHLFHRIIPDH 905
            ..|::| ...||.|.|.|:|..|..::..|.|| ....|:|..|||.:.:.|.....|....| |
Mouse   232 SFDYWC-DVNSPYIQPVGWCQENGRTLVAPQGYPHPDKFSWTDYLRASQSKAVPAKAFGMRTP-H 294

  Fly   906 GFEVGMSLECADLMDPRLVCVATVARVVGRLLKVHFDGWTDEYDQWLDCESADIYPVGWCVLVNH 970
            ||...|.||..|..:|:|:.|||:|.|....:|:|||||..:||.|:|.:|.||:|:|||.:..|
Mouse   295 GFLPNMKLEAVDKRNPQLIRVATIADVDDYRVKIHFDGWDHKYDYWVDADSQDIHPIGWCDVTGH 359

  Fly   971 KLEGPPRVAHQQ--APKPA-PKP------KIQRKRKPKKGAAGGKTPTDNNTQSVKSRTIALKTT 1026
            .||.|....|.:  ..:|| |.|      .|:..|.....:|.|...:|.|.:    |..||:..
Mouse   360 PLEVPYGSKHVKILPGQPACPTPGCRGIGHIRGPRYAGHHSAFGCPYSDVNLK----REAALQDR 420

  Fly  1027 PHLPKLSIKLELKPEHHNAAFYENNQPEEEGDEEDP---DADGDGDGSTSHISEQSTTQSSSDLI 1088
            .. .:....|||.|.|..:              |:|   :.:|..:.:.   |:....|.:..|.
Mouse   421 LR-EQTQANLELDPSHSKS--------------ENPCNLNVNGKCENAN---SQCRLVQQAKCLK 467

  Fly  1089 AGSGSGSGSASLVTLATGSNKTVKKSTTK------SPAPPTVGRKATSY-----IANSSATNNKY 1142
            ..........:|..:.....:.::.|..:      .|...|    :||.     |..|...:.|.
Mouse   468 IKGKEDIDLDNLFRVLVFHPRRLEYSAAQVQQMLHQPLSMT----STSAHPFRDIPLSREQHCKL 528

  Fly  1143 IPRLADIDSSEPHLELVPDTWNVYDVSQFLR-VNDCTAHCDTFSRNKIDGKRLLQLTKDDIMPLL 1206
            :|.:|||.:|:      ...|.|.:|::|:: :..|..|...|.:.:||||..|.||:.||:.::
Mouse   529 LPGVADIQASQ------VARWTVDEVAEFVQSLLGCEEHAKCFKKEQIDGKAFLLLTQADIVKVM 587

  Fly  1207 GMKVGPALKISDLIAQLK 1224
            .:|:||||||.:.|...:
Mouse   588 RIKLGPALKIYNSILMFR 605

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SfmbtNP_001137821.1 MBT 542..647 CDD:214723
MBT 658..753 CDD:214723 32/103 (31%)
MBT 767..871 CDD:214723 29/104 (28%)
MBT 882..975 CDD:214723 40/92 (43%)
TonB_N <975..1040 CDD:292650 18/73 (25%)
SAM_Scm-like-4MBT 1160..1226 CDD:188979 24/66 (36%)
SAM 1160..1224 CDD:197735 24/64 (38%)
L3mbtl4NP_796252.2 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..48
MBT 1 52..152 33/104 (32%)
MBT 55..149 CDD:214723 31/100 (31%)
MBT 2 160..260 29/110 (26%)
MBT 164..260 CDD:214723 29/106 (27%)
MBT 3 269..364 42/95 (44%)
MBT 273..364 CDD:214723 40/91 (44%)
zf-C2HC 379..405 CDD:279824 6/25 (24%)
SAM 540..607 CDD:197735 24/66 (36%)
SAM_Scm-like-3MBT3,4 540..605 CDD:188981 24/64 (38%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C167839873
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3766
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
32.740

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