DRSC/TRiP Functional Genomics Resources

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Protein Alignment Sfmbt and L3mbtl1

DIOPT Version :9

Sequence 1:NP_001137821.1 Gene:Sfmbt / 34709 FlyBaseID:FBgn0032475 Length:1243 Species:Drosophila melanogaster
Sequence 2:XP_017447769.1 Gene:L3mbtl1 / 311613 RGDID:1307316 Length:884 Species:Rattus norvegicus


Alignment Length:933 Identity:212/933 - (22%)
Similarity:331/933 - (35%) Gaps:287/933 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly   372 DQATTSSPDPGAGSESADL-PGDQ-----QQSQSDIELD-------LHAAHIKNANYRFRITDQS 423
            |....|:|..|:|...::| |..|     ..:|:.||::       .|...........:..|..
  Rat   152 DWTGVSAPLAGSGMRPSELGPASQFRINEYATQNMIEIERPRSPEQRHEGGTAGREADIQHPDVH 216

  Fly   424 KITQLNSFGE--PMSMGGDAAANNVQMAADETIAALNGGAVGDATAPGSTEEGASTPNSYLSAAP 486
            |..|     |  |.....||.:...|....:....|:.|:.||.......:......||..:.|.
  Rat   217 KDPQ-----EVIPQEPSVDAGSCKCQTCGPQQSIGLDVGSSGDRCPQPFQKRSVIVENSGCTVAS 276

  Fly   487 ---TPKALRLFKDIY--PQDDLPQIPKY------ERLPVPCP------QMEKIISIRRRMYDPTH 534
               .|...|..|:..  .::..|:..|.      :|.|.|..      ...:::|..::     .
  Rat   277 ELIKPMKKRKHKEYQSPSEESEPEAMKQGKGKDPDREPTPGTSENEEWSRSQLVSSEKK-----E 336

  Fly   535 SYDWLPRLSKENFNAAPVTCFPHAPGCEVWDN-LGVGMKVEVENTDCDSIEVIQPGQTPTSFWVA 598
            .:.|...|.::....|||:.|..:.......| ..:|||          :|.:.| |.|:.::|.
  Rat   337 GWSWESYLEEQKAVTAPVSLFQDSQAVTHNKNGFKLGMK----------LEGVDP-QHPSMYFVL 390

  Fly   599 TILEIKGYKALMSYEGFDTDSHDFWVNLCNAEVHSVGWCATRGKPLIPPRTIEHKYKDWKDFLVG 663
            |:.|:.||:..:.::|: ::.||||||..:.::|..||....|..|.||:..:.:...|..:|  
  Rat   391 TVAEVCGYRLRLHFDGY-SECHDFWVNANSPDIHPAGWFEKTGHKLQPPKGYKEEEFSWSQYL-- 452

  Fly   664 RLSGARTLPSN-FYNKINDSLQSRFRLGLNLECVDKDRISQVRLATVTKIVGKRLFLRYFDSDD- 726
            |.:.|:..|.: |.::.:......|::|:.||.||:...|.|.:|:||.:|..|..:.:.|.|| 
  Rat   453 RSTKAQAAPKHLFVSQSHSPPPVGFQVGMKLEAVDRMNPSLVCVASVTDVVASRFLVHFDDWDDT 517

  Fly   727 -GFWCHEDSPIIHPVGWATTVGHNLAAPQDYLERMLAGREAMIEVHEDDATIELFKMNFTFDEYY 790
             .:||...||.||||||....|..|..||||                                  
  Rat   518 YDYWCDASSPYIHPVGWCQKQGKPLTPPQDY---------------------------------- 548

  Fly   791 SDGKTNSFVEGMKLEAVDPLNLSSICPATVMAVLKFGYMMIRIDSYQPDASGSDWFCYHEKSPCI 855
                                                           ||                
  Rat   549 -----------------------------------------------PD---------------- 550

  Fly   856 FPAGFCSVNNISVTPPNGYDSRTFTWEGYLRDTGAVAAGQHLFHRIIPDHGFEVGMSLECADLMD 920
             |..||                   ||.||.:||..|.....| ::.|.|.|.|.|.||..|..:
  Rat   551 -PDSFC-------------------WEKYLEETGTSAVPTWAF-KVRPPHSFLVNMKLEAVDRRN 594

  Fly   921 PRLVCVATVARVVGRLLKVHFDGWTDEYDQWLDCESADIYPVGWCVLVNHKLEGPPRVAHQQAPK 985
            |.|:.||:|..|....:|:|||||:..||.|:|.:..||:|.|||....|.||.|.|.....:..
  Rat   595 PALIRVASVEDVEDHRIKLHFDGWSHNYDFWIDADHPDIHPAGWCSKTGHPLEPPLRPRESSSAS 659

  Fly   986 PAPKPKIQRKRKPKKGAAGGKTPTDNNTQSVKSRTIALKTTPHLPKLSIKLELKPEHHNAAFYEN 1050
            |...|.:..:..|.                       .||:.:                 :|:..
  Rat   660 PGGCPPLSHRSPPH-----------------------TKTSKY-----------------SFHHR 684

  Fly  1051 NQPEEEGDEEDPDADGDGDGS---TSH-------ISEQSTTQSSSDLIAGSGSGSGSASLVTLAT 1105
            ..|       .|..||.|..:   |:|       ::|::.::..::|       |.|.:......
  Rat   685 KCP-------TPGCDGSGHVTGKFTAHHCLSGCPLAERNQSRLKAEL-------SDSETTARKKN 735

  Fly  1106 GSNKTVKKST------------TKSP------APPTVGRKATSYIANSSATNNKYIPRLADIDSS 1152
            .||.:.:|..            .|.|      .||:|..::. :::.        :|..||...|
  Rat   736 QSNLSPRKKPRHQGRIGRPPKYRKMPDEDFQALPPSVVHQSL-FMST--------LPTHADRPLS 791

  Fly  1153 ---EPHLELVP----------DTWNVYDVSQFLRVNDCTAHCD---TFSRNKIDGKRLLQLTKDD 1201
               |.|.:|:|          ..|.:.:|..|  |...|...|   .|....|||:..|.||:.|
  Rat   792 VCWEQHCKLLPGVAGISASAVSKWTIEEVFGF--VQTLTGSEDQARLFKEEMIDGEAFLLLTQAD 854

  Fly  1202 IMPLLGMKVGPALKISDLIAQLK 1224
            |:.::.:|:||||||.:.|...|
  Rat   855 IVKIMSVKLGPALKIYNAILMFK 877

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SfmbtNP_001137821.1 MBT 542..647 CDD:214723 30/105 (29%)
MBT 658..753 CDD:214723 33/97 (34%)
MBT 767..871 CDD:214723 5/103 (5%)
MBT 882..975 CDD:214723 40/92 (43%)
TonB_N <975..1040 CDD:292650 7/64 (11%)
SAM_Scm-like-4MBT 1160..1226 CDD:188979 25/78 (32%)
SAM 1160..1224 CDD:197735 24/76 (32%)
L3mbtl1XP_017447769.1 None


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C166343695
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3766
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
43.740

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