DRSC/TRiP Functional Genomics Resources

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Protein Alignment Sfmbt and Samd7

DIOPT Version :10

Sequence 1:NP_001137821.1 Gene:Sfmbt / 34709 FlyBaseID:FBgn0032475 Length:1243 Species:Drosophila melanogaster
Sequence 2:NP_001178632.1 Gene:Samd7 / 310257 RGDID:1308931 Length:445 Species:Rattus norvegicus


Alignment Length:427 Identity:82/427 - (19%)
Similarity:122/427 - (28%) Gaps:183/427 - (42%)


- Green bases have known domain annotations that are detailed below.


  Fly   974 GPPRVAHQQAPKPAPKPKIQRKRKPKKGAAGGKTPTDNNTQSVKSR----TIALKTTPH------ 1028
            ||.||:  ..|.|...|...|...|...|     |||.:...|.|:    .:....||:      
  Rat    15 GPQRVS--MVPSPFGPPIGDRDALPSTIA-----PTDPSQFCVPSQFGSSGLPSANTPNPLPGHF 72

  Fly  1029 ------LPKLSIKL-----ELKPEHHNA-------AFYENNQPEEEGDEEDPDADGDGDGSTSHI 1075
                  ||...||.     |:...||.|       :.|:..:.|                   .:
  Rat    73 YSGWGILPPEPIKAVTTRNEMFERHHAARAEMEMYSLYQQRRME-------------------RV 118

  Fly  1076 SEQSTTQSSSDLIAGSGSGSGSASL-------------------------VTLAT--------GS 1107
            :.:..:.....|..|||...|.|..                         |.|||        |.
  Rat   119 NPKGLSGLGIPLFYGSGCLGGPAGFQGRSTLPASDVHVHRSTFRHLQGNPVLLATRPHFTECWGQ 183

  Fly  1108 NKTVKKSTTKSPAP-------------------PTVGRKATSYIANSS-ATNNKYIPRLADIDS- 1151
            ...:::.|.....|                   ||...:...||.:.. ..:|:..||:.|.:. 
  Rat   184 KYRLRRGTVYQKPPEIDTESFKSQADEKSSGQMPTAPYEEEEYIKDPEIGVDNQQEPRVTDGNPT 248

  Fly  1152 ---SEPHLELVPD---------------------------------------------------- 1161
               :.||.|..|:                                                    
  Rat   249 AVLANPHGEPQPNQRKPSSMEAKAWDDGKGEPSEQGYEGCDEKNGVCLPASTLPLPGTQEPVALQ 313

  Fly  1162 ---------TWNVYDVSQFLR-VNDCTAHCDTFSRNKIDGKRLLQLTKDDIMPLLGMKVGPALKI 1216
                     .|.|.||..|:| :..|:.:...|..:.|||:.|..||:..:...:|:|:||||||
  Rat   314 ENRPLSDIHKWTVDDVYNFIRSLPGCSDYAQVFKDHAIDGETLPLLTEQHLRGTMGLKLGPALKI 378

  Fly  1217 SDLIAQ----LKCKVNPG------RARSHKTNKSPFL 1243
            ...::|    :.||..|.      :|.....:.||.|
  Rat   379 QSQVSQHVGNMFCKKLPSLPSHARQAFDQPADTSPLL 415

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SfmbtNP_001137821.1 MBT_dSfmbt_rpt1 564..672 CDD:439109
MBT_dSfmbt_rpt2 674..753 CDD:439112
MBT_dSfmbt_rpt3 798..904 CDD:439115
MBT_dSfmbt_rpt4 905..976 CDD:439118 1/1 (100%)
SAM_Scm-like-4MBT 1160..1226 CDD:188979 24/131 (18%)
Samd7NP_001178632.1 SAM_Samd7,11 321..388 CDD:188978 23/66 (35%)
Blue background indicates that the domain is not in the aligned region.

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