DRSC/TRiP Functional Genomics Resources

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Protein Alignment Sfmbt and Sfmbt2

DIOPT Version :10

Sequence 1:NP_001137821.1 Gene:Sfmbt / 34709 FlyBaseID:FBgn0032475 Length:1243 Species:Drosophila melanogaster
Sequence 2:NP_001100834.2 Gene:Sfmbt2 / 307106 RGDID:1305027 Length:890 Species:Rattus norvegicus


Alignment Length:888 Identity:210/888 - (23%)
Similarity:320/888 - (36%) Gaps:248/888 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly   536 YDWLPRLSKENFNAAPVTCFPHAPGCEVWDNLGVGMKVEVENTDCDSIEVIQPGQTPTSFWVATI 600
            :.|...|.:....|.|..||.|.. ..:..|...|||:||.|.:           .|.::|||||
  Rat    43 FSWGDYLDETGARAVPHVCFRHVE-ISIQSNFQPGMKLEVANKN-----------HPDTYWVATI 95

  Fly   601 LEIKGYKALMSYEGFDTDSH-DFWVNLCNAEVHSVGWCATRGKPLIPPRTIEHKYKDWKDFLVGR 664
            :...|...|:.|.|:..|.. |||.::..|::|.||||....|.|.||..|:.||.||::||:..
  Rat    96 ITTCGQLLLLRYCGYGEDRRADFWCDVIIADLHPVGWCTQNNKVLRPPDAIKEKYADWEEFLIHE 160

  Fly   665 LSGARTLPSNFYNKINDSLQSRFRLGL-----NLECVDKDRISQVRLATVTKIVGKRLFLRYF-- 722
            |:|:||.|::.   :...|:.:..:.|     .:|..|.....|..:.:|.:.||.||.|||.  
  Rat   161 LTGSRTAPASL---LEGPLRGKGPIDLITVDSLIELQDSQNPFQYWIVSVIENVGGRLRLRYVGL 222

  Fly   723 ---DSDDGFWCHEDSPIIHPVGWATTVGHNLAAPQD--YL----ERMLAGREAMIEVHEDDATIE 778
               :|.|.:..:.|.. :.|:||.....:.:..|.:  ||    |...|..:|::...|....:|
  Rat   223 EHTESYDRWLFYLDYR-LRPIGWCQEKKYRMDPPSELYYLKLPFEWKCALEKALLAAAECPLPME 286

  Fly   779 LFKMNFTFDEYYSDGKTNSFVEGMKLEAV---DPLNLSSICPATVMAVLKFGYMMIRIDSYQPDA 840
            :||       .::|..::.|..||:||.:   ||.:   |.||||..|....:..:.||..:.:.
  Rat   287 VFK-------DHADLGSHFFTVGMRLETLHINDPFH---IYPATVTKVFNSQFFQVAIDDLRAET 341

  Fly   841 SGSDWFCYHEKSPCIFPAGFCSVNNISVTPPNGYDSRTFTWEGYLRDTGAVAAGQHLFHRIIPDH 905
            :|....| |..|..|.|..:|..|.:::.||.||..:.|.|..|.:...|..|..:.|..... .
  Rat   342 NGLTMLC-HADSLGILPVQWCLKNGVNLAPPKGYSGQDFNWVDYHKQREAEGAPPYCFKNTFA-R 404

  Fly   906 GFEVGMSLECADLMDPRLVCVATVARVVGRLLKVHFDG-WTDEYDQWLDCESADIYPVGWCVLVN 969
            ||...|.||..:..:|..||||||..|.|.||.:..:| .|...:..:|.:|.||:|||||...:
  Rat   405 GFAKNMKLEAVNPKNPGEVCVATVISVRGSLLWLRLEGVETPMPEIIVDIDSMDIFPVGWCEANS 469

  Fly   970 HKLEGPPRVAHQQAPKPAPKPKIQRKRKP------------------KKGAAGGK---------- 1006
            :.|..|.:.:.:...||...|..:....|                  ..|||..|          
  Rat   470 YPLTTPYKSSSKSKKKPITVPPEKPSLPPVPVENIPQELCLPPQTDTAAGAANEKYYCPQLFVNH 534

  Fly  1007 ---------------------------------TPTDNNTQS----------------------- 1015
                                             |...|....                       
  Rat   535 RCFSGPFLNKGRISELPQSVGPGKCVLVLKEILTMITNAAYKPGRVLRELQLVEDPEWDFQEEVL 599

  Fly  1016 ------------VKSRTIALKTTPHLPKLSIKLELKPEHHNAAFYENNQPE-------------- 1054
                        ||....|.:.|....::..|||..|...:......|.||              
  Rat   600 KAKYRGKIYRAVVKIVRTADQVTSFCQQVCAKLECCPNLFSPLLISENCPENCSIRTKTKYTYYY 664

  Fly  1055 --------------------------------------------------EEGDEEDPDADGDGD 1069
                                                              :|.:|:||:|.....
  Rat   665 GKRKRIIKPPLGESNTESAPKPTRRRKRRKSIYVQKKRKSSAVAMPATSAQETEEDDPEALDTAS 729

  Fly  1070 GSTSHISEQSTTQ----------SSSDLIAGSGSGSGSASLVTLATGSNKTVKKSTTKSPAPPTV 1124
            ..|.::.:...||          |...:|....||:                    .|.| |...
  Rat   730 EETGYVVQNYKTQHVPVEMPFTRSQRAMILRKHSGA--------------------VKHP-PVER 773

  Fly  1125 GRKATSYIANSSATNNKYIPRLADIDSSEPH--------LELVPDTWNVYDVSQFLRVNDCTAHC 1181
            .|:..|..:.:|:.|...:|.:....|.:|.        ||..|..|:|.||.:|:::.||....
  Rat   774 ARRVRSVHSTASSNNRNKVPLVRIEKSEDPRQSEEEKLILESNPLEWSVTDVVRFIKLTDCAPLA 838

  Fly  1182 DTFSRNKIDGKRLLQLTKDDIMPLLGMKVGPALKISDLIAQLK 1224
            ..|....|||:.||.||...:...:.:|:|||:|:...|.::|
  Rat   839 RIFQEQDIDGQALLLLTLPTVQECMELKLGPAIKLCHQIERVK 881

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SfmbtNP_001137821.1 MBT_dSfmbt_rpt1 564..672 CDD:439109 42/108 (39%)
MBT_dSfmbt_rpt2 674..753 CDD:439112 19/88 (22%)
MBT_dSfmbt_rpt3 798..904 CDD:439115 33/108 (31%)
MBT_dSfmbt_rpt4 905..976 CDD:439118 28/71 (39%)
SAM_Scm-like-4MBT 1160..1226 CDD:188979 23/65 (35%)
Sfmbt2NP_001100834.2 MBT_SFMBT2_rpt1 70..163 CDD:439102 39/103 (38%)
MBT 182..269 CDD:459242 22/87 (25%)
MBT_SFMBT2_rpt3 297..389 CDD:439106 30/95 (32%)
MBT 405..493 CDD:459242 32/87 (37%)
SLED 527..641 CDD:463469 10/113 (9%)
SAM_Scm-like-4MBT1,2 807..890 CDD:188980 25/75 (33%)

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