DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Sfmbt and Sfmbt2

DIOPT Version :9

Sequence 1:NP_001137821.1 Gene:Sfmbt / 34709 FlyBaseID:FBgn0032475 Length:1243 Species:Drosophila melanogaster
Sequence 2:NP_001100834.2 Gene:Sfmbt2 / 307106 RGDID:1305027 Length:890 Species:Rattus norvegicus


Alignment Length:888 Identity:210/888 - (23%)
Similarity:320/888 - (36%) Gaps:248/888 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly   536 YDWLPRLSKENFNAAPVTCFPHAPGCEVWDNLGVGMKVEVENTDCDSIEVIQPGQTPTSFWVATI 600
            :.|...|.:....|.|..||.|.. ..:..|...|||:||.|.:           .|.::|||||
  Rat    43 FSWGDYLDETGARAVPHVCFRHVE-ISIQSNFQPGMKLEVANKN-----------HPDTYWVATI 95

  Fly   601 LEIKGYKALMSYEGFDTDSH-DFWVNLCNAEVHSVGWCATRGKPLIPPRTIEHKYKDWKDFLVGR 664
            :...|...|:.|.|:..|.. |||.::..|::|.||||....|.|.||..|:.||.||::||:..
  Rat    96 ITTCGQLLLLRYCGYGEDRRADFWCDVIIADLHPVGWCTQNNKVLRPPDAIKEKYADWEEFLIHE 160

  Fly   665 LSGARTLPSNFYNKINDSLQSRFRLGL-----NLECVDKDRISQVRLATVTKIVGKRLFLRYF-- 722
            |:|:||.|::.   :...|:.:..:.|     .:|..|.....|..:.:|.:.||.||.|||.  
  Rat   161 LTGSRTAPASL---LEGPLRGKGPIDLITVDSLIELQDSQNPFQYWIVSVIENVGGRLRLRYVGL 222

  Fly   723 ---DSDDGFWCHEDSPIIHPVGWATTVGHNLAAPQD--YL----ERMLAGREAMIEVHEDDATIE 778
               :|.|.:..:.|.. :.|:||.....:.:..|.:  ||    |...|..:|::...|....:|
  Rat   223 EHTESYDRWLFYLDYR-LRPIGWCQEKKYRMDPPSELYYLKLPFEWKCALEKALLAAAECPLPME 286

  Fly   779 LFKMNFTFDEYYSDGKTNSFVEGMKLEAV---DPLNLSSICPATVMAVLKFGYMMIRIDSYQPDA 840
            :||       .::|..::.|..||:||.:   ||.:   |.||||..|....:..:.||..:.:.
  Rat   287 VFK-------DHADLGSHFFTVGMRLETLHINDPFH---IYPATVTKVFNSQFFQVAIDDLRAET 341

  Fly   841 SGSDWFCYHEKSPCIFPAGFCSVNNISVTPPNGYDSRTFTWEGYLRDTGAVAAGQHLFHRIIPDH 905
            :|....| |..|..|.|..:|..|.:::.||.||..:.|.|..|.:...|..|..:.|..... .
  Rat   342 NGLTMLC-HADSLGILPVQWCLKNGVNLAPPKGYSGQDFNWVDYHKQREAEGAPPYCFKNTFA-R 404

  Fly   906 GFEVGMSLECADLMDPRLVCVATVARVVGRLLKVHFDG-WTDEYDQWLDCESADIYPVGWCVLVN 969
            ||...|.||..:..:|..||||||..|.|.||.:..:| .|...:..:|.:|.||:|||||...:
  Rat   405 GFAKNMKLEAVNPKNPGEVCVATVISVRGSLLWLRLEGVETPMPEIIVDIDSMDIFPVGWCEANS 469

  Fly   970 HKLEGPPRVAHQQAPKPAPKPKIQRKRKP------------------KKGAAGGK---------- 1006
            :.|..|.:.:.:...||...|..:....|                  ..|||..|          
  Rat   470 YPLTTPYKSSSKSKKKPITVPPEKPSLPPVPVENIPQELCLPPQTDTAAGAANEKYYCPQLFVNH 534

  Fly  1007 ---------------------------------TPTDNNTQS----------------------- 1015
                                             |...|....                       
  Rat   535 RCFSGPFLNKGRISELPQSVGPGKCVLVLKEILTMITNAAYKPGRVLRELQLVEDPEWDFQEEVL 599

  Fly  1016 ------------VKSRTIALKTTPHLPKLSIKLELKPEHHNAAFYENNQPE-------------- 1054
                        ||....|.:.|....::..|||..|...:......|.||              
  Rat   600 KAKYRGKIYRAVVKIVRTADQVTSFCQQVCAKLECCPNLFSPLLISENCPENCSIRTKTKYTYYY 664

  Fly  1055 --------------------------------------------------EEGDEEDPDADGDGD 1069
                                                              :|.:|:||:|.....
  Rat   665 GKRKRIIKPPLGESNTESAPKPTRRRKRRKSIYVQKKRKSSAVAMPATSAQETEEDDPEALDTAS 729

  Fly  1070 GSTSHISEQSTTQ----------SSSDLIAGSGSGSGSASLVTLATGSNKTVKKSTTKSPAPPTV 1124
            ..|.::.:...||          |...:|....||:                    .|.| |...
  Rat   730 EETGYVVQNYKTQHVPVEMPFTRSQRAMILRKHSGA--------------------VKHP-PVER 773

  Fly  1125 GRKATSYIANSSATNNKYIPRLADIDSSEPH--------LELVPDTWNVYDVSQFLRVNDCTAHC 1181
            .|:..|..:.:|:.|...:|.:....|.:|.        ||..|..|:|.||.:|:::.||....
  Rat   774 ARRVRSVHSTASSNNRNKVPLVRIEKSEDPRQSEEEKLILESNPLEWSVTDVVRFIKLTDCAPLA 838

  Fly  1182 DTFSRNKIDGKRLLQLTKDDIMPLLGMKVGPALKISDLIAQLK 1224
            ..|....|||:.||.||...:...:.:|:|||:|:...|.::|
  Rat   839 RIFQEQDIDGQALLLLTLPTVQECMELKLGPAIKLCHQIERVK 881

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SfmbtNP_001137821.1 MBT 542..647 CDD:214723 35/105 (33%)
MBT 658..753 CDD:214723 26/104 (25%)
MBT 767..871 CDD:214723 28/106 (26%)
MBT 882..975 CDD:214723 32/93 (34%)
TonB_N <975..1040 CDD:292650 18/160 (11%)
SAM_Scm-like-4MBT 1160..1226 CDD:188979 23/65 (35%)
SAM 1160..1224 CDD:197735 22/63 (35%)
Sfmbt2NP_001100834.2 None


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C166343703
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3766
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
43.740

Return to query results.
Submit another query.