DRSC/TRiP Functional Genomics Resources

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Protein Alignment Sfmbt and L3mbtl2

DIOPT Version :10

Sequence 1:NP_001137821.1 Gene:Sfmbt / 34709 FlyBaseID:FBgn0032475 Length:1243 Species:Drosophila melanogaster
Sequence 2:XP_008763933.1 Gene:L3mbtl2 / 300320 RGDID:1308569 Length:728 Species:Rattus norvegicus


Alignment Length:809 Identity:285/809 - (35%)
Similarity:397/809 - (49%) Gaps:183/809 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly   252 TENT-SSKQMQRT----------YSTAKGANSTATTATCS--ASTSSALRSQRKTRKIEPVNRPG 303
            ||.| ||:.|:..          |.:.:..||:|.:.:.|  ..:|.|....|:.         |
  Rat     7 TEETPSSEPMEEEEDDDLELFGGYDSFRSYNSSAGSESSSYLEESSEAENEDREA---------G 62

  Fly   304 LVLKTPIAYRGNIDPSVIPIQKDGMAVCKRCGAIGVKHTFYTKSRRFCSMACARGELYSLVLNTK 368
            .:..:|:....:.:...:.......|||:.||.:|.:..|::|::||||::|:|.  ||  .|:|
  Rat    63 ELPTSPLHLFSSANNRALDGSGSEPAVCEMCGIVGTREAFFSKTKRFCSVSCSRS--YS--SNSK 123

  Fly   369 MEGDQATTSSPDPGAGSESADLPGDQQQSQSDIELDLHAAHIKNANYRFRITDQSKITQLNSFGE 433
            .....|......|                                      |.::|:..      
  Rat   124 KASILARLQGKPP--------------------------------------TKKAKVLH------ 144

  Fly   434 PMSMGGDAAANNVQMAADETIAALNGGAVGDATAPGSTEEGASTPNSYLSAAPTPKALRLFKDIY 498
                   .||.:.::.|  .:.|...|.:.|.|..|                             
  Rat   145 -------KAAWSAKIGA--FLHAQGTGQLADGTPTG----------------------------- 171

  Fly   499 PQDDLPQIPKYERLPVPCPQMEKIISIRRRMYDPTHSYDWLPRLSKENFNAAPVTCFPHAPGCEV 563
             ||.|                             ...:||...|...::.||||.||.|.|..:.
  Rat   172 -QDAL-----------------------------VLGFDWGKFLKDHSYKAAPVGCFKHVPLYDQ 206

  Fly   564 WDNLGVGMKVEVENTDCDSIEVIQPGQTPTSFWVATILEIKGYKALMSYEGFDTD-SHDFWVNLC 627
            |:::..||||||.|:|     .:.|.:.   :|:||:::..||:.|:.||||:.| |||||.||.
  Rat   207 WEDVMKGMKVEVLNSD-----AVLPSRV---YWIATVIQAAGYRVLLRYEGFENDASHDFWCNLG 263

  Fly   628 NAEVHSVGWCATRGKPLIPPRTIEHKYKDWKDFLVGRLSGARTLPSNFYNKINDSLQSRFRLGLN 692
            ..:||.:||||...|.|:|||||..|:.|||.:|:.||.|:||||::|:.|:.:|::..||.|:.
  Rat   264 TVDVHPIGWCAINSKILVPPRTIHAKFTDWKSYLMKRLVGSRTLPADFHIKMVESMKYPFRQGMR 328

  Fly   693 LECVDKDRISQVRLATVTKIVGKRLFLRY--FDSDDGFWCHEDSPIIHPVGWATTVGHNLAAPQD 755
            ||.|||.::|:.|:|.|..::|.||.|.|  .||||.||||..||:||||||:..|||.:     
  Rat   329 LEVVDKTQVSRTRMAVVDTVIGGRLRLLYEDGDSDDDFWCHMWSPLIHPVGWSRRVGHGI----- 388

  Fly   756 YLERMLAGREAMIEVHED------DATIELFKMNFTFDEYYSDGKTNSFVEGMKLEAVDPLNLSS 814
                .::.|...:..|..      ||...|||   .....|::|  ..|.|||||||:|||||.:
  Rat   389 ----KMSERRCDMSHHPTFRKIYCDAVPYLFK---KVRAVYTEG--GWFEEGMKLEAIDPLNLGN 444

  Fly   815 ICPATVMAVLKFGYMMIRIDSYQPDASGSDWFCYHEKSPCIFPAGFCSVNNISVTPPNGYDSRTF 879
            ||.||:..||..||:||.:|. .|...||||||||..|..||||.||..|:|.:|||.||:::.|
  Rat   445 ICVATICKVLLDGYLMICVDG-GPSTDGSDWFCYHASSHAIFPATFCQKNDIELTPPKGYETQPF 508

  Fly   880 TWEGYLRDTGAVAAGQHLFHRIIPDHGFEVGMSLECADLMDPRLVCVATVARVVGRLLKVHFDGW 944
            .||.||..|.:.||...||:...|:|||:|||.||..|||:|||:|||||.|||.|||.:|||||
  Rat   509 DWESYLEKTKSKAAPARLFNMDCPNHGFKVGMKLEAVDLMEPRLICVATVKRVVHRLLSIHFDGW 573

  Fly   945 TDEYDQWLDCESADIYPVGWCVLVNHKLEGPPRVAHQQAPKPAPKPKIQRKRKPKK-GAAGGKTP 1008
            .:|||||:||||.||||||||.|..::|: ||..|....|:   |.|...|:|.|: |....:.|
  Rat   574 DNEYDQWVDCESPDIYPVGWCELTGYQLQ-PPVSAEPNTPQ---KGKDATKKKKKQFGKKRKRIP 634

  Fly  1009 TDNNTQSVKSRTIALKTTPHLPKLSIKLE 1037
            :        ::|..|:.:...|.|...||
  Rat   635 S--------AKTRPLRQSSKKPLLEDNLE 655

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SfmbtNP_001137821.1 MBT_dSfmbt_rpt1 564..672 CDD:439109 51/108 (47%)
MBT_dSfmbt_rpt2 674..753 CDD:439112 39/80 (49%)
MBT_dSfmbt_rpt3 798..904 CDD:439115 57/105 (54%)
MBT_dSfmbt_rpt4 905..976 CDD:439118 49/70 (70%)
SAM_Scm-like-4MBT 1160..1226 CDD:188979
L3mbtl2XP_008763933.1 MBT_L3MBTL2_rpt1 207..308 CDD:439111 51/108 (47%)
MBT_L3MBTL2_rpt2 310..393 CDD:439114 39/91 (43%)
MBT_L3MBTL2_rpt3 428..518 CDD:439117 52/90 (58%)
MBT_dSfmbt-like_rpt4 534..604 CDD:439090 49/70 (70%)
Blue background indicates that the domain is not in the aligned region.

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