DRSC/TRiP Functional Genomics Resources

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Protein Alignment Sfmbt and L3mbtl3

DIOPT Version :10

Sequence 1:NP_001137821.1 Gene:Sfmbt / 34709 FlyBaseID:FBgn0032475 Length:1243 Species:Drosophila melanogaster
Sequence 2:NP_766375.1 Gene:L3mbtl3 / 237339 MGIID:2143628 Length:883 Species:Mus musculus


Alignment Length:1125 Identity:225/1125 - (20%)
Similarity:368/1125 - (32%) Gaps:413/1125 - (36%)


- Green bases have known domain annotations that are detailed below.


  Fly   237 MGTLNG-------NAFGNIMVSTENTSSKQMQRTYSTAKGANSTATTATCSASTSSALRSQRKTR 294
            :|||.|       |.||.:.|.|:.:..:.:::         :||||.....:...|..|...:|
Mouse    25 VGTLPGSDLKFRVNEFGALEVITDESEMESVKK---------ATATTTWMVPTAQDAPTSPPSSR 80

  Fly   295 KIEP----VNRPGLVL----KTPIAYRGNIDPSVIPIQKDGMAVCKRCGAIGVKHTFYTKSRRFC 351
            .:.|    .:.||...    ||.:.:|.....     :.||:..|:.|...| .........::|
Mouse    81 PVFPPAYWTSPPGCPTVFSEKTGVPFRLKEQS-----KADGLQFCENCCQYG-NGDECLSGGKYC 139

  Fly   352 SMACARGELYSLVLNTKMEGDQA-TTSSPDPGAG-------SESADLPGDQQQSQSDIELDLHAA 408
            |..|||   ::...:.|.|.|.. .....||...       |..||...|.::...::| :....
Mouse   140 SQNCAR---HAKDKDQKDERDGGEDNDEEDPKCSRKKKPKLSLKADSKDDGEERDDEME-NKQDG 200

  Fly   409 HIKNANYRFRITDQSKITQLNSFGEPMSMGGDAAANNVQMAADETIAALNGGAVGDATAPGSTEE 473
            .|...:.|.|                ....||:|                      ....|...:
Mouse   201 RILRGSQRAR----------------RKRRGDSA----------------------VLKQGLPPK 227

  Fly   474 GAST--PNSYLSAAPTPKALRLFKDIYPQDDLPQIPKYERLPVPCPQMEKIISIRRRMYDPTHSY 536
            |..|  ..|||                                   :.||.:::..:::....|:
Mouse   228 GKKTWCWASYL-----------------------------------EEEKAVAVPTKLFKEHQSF 257

  Fly   537 DWLPRLSKENFNAAPVTCFPHAPGCEVWDNLGVGMKVEVENTDCDSIEVIQPGQTPTSFWVATIL 601
            .:    :|..|.                    ||||:|..:.|..::           :.|.|:.
Mouse   258 PY----NKNGFK--------------------VGMKLEGVDPDHQAM-----------YCVLTVA 287

  Fly   602 EIKGYKALMSYEGFDTDSHDFWVNLCNAEVHSVGWCATRGKPLIPPRTIEHKYKDWKDFLVGRLS 666
            |:.||:..:.::|: :|.:|||||....::|.||||...|..|.||:..:.:..:|:.:|  :..
Mouse   288 EVCGYRIKLHFDGY-SDCYDFWVNADALDIHPVGWCEKTGHKLRPPKGYKEEEFNWQSYL--KTC 349

  Fly   667 GARTLPSNFYNKINDS-LQSRFRLGLNLECVDKDRISQVRLATVTKIVGKRLFLRYFDSDD---G 727
            .|:..|.:.:...|.: :.|.||:|:.||..||...|.:.:||||.:|..| ||.:||:.|   .
Mouse   350 KAQAAPKSLFENQNITVIPSGFRVGMKLEAADKKSPSVICVATVTDMVDNR-FLVHFDNWDESYD 413

  Fly   728 FWCHEDSPIIHPVGWATTVGHNLAAPQDYLERMLAGREAMIEVHEDDATIELFKMNFTFDEYYSD 792
            :||..:||.||||||                                                  
Mouse   414 YWCESNSPHIHPVGW-------------------------------------------------- 428

  Fly   793 GKTNSFVEGMKLEAVDPLNLSSICPATVMAVLKFGYMMIRIDSYQPDASGSDWFCYHEKSPCIFP 857
                                                                  |...:...|.|
Mouse   429 ------------------------------------------------------CKEHRRTLITP 439

  Fly   858 AGFCSVNNISVTPPNGYDSRTFTWEGYLRDTGAVAAGQHLFHRIIPDHGFEVGMSLECADLMDPR 922
            .|:..|.:             |:|:.||.:|.::.|....| ::.|.|||:..|.||..|..:|.
Mouse   440 PGYSHVKH-------------FSWDKYLEETNSLPAPARAF-KVKPPHGFQKKMKLEAVDKRNPL 490

  Fly   923 LVCVATVARVVGRLLKVHFDGWTDEYDQWLDCESADIYPVGWCVLVNHKLEGPPRVAHQQAPK-- 985
            .:.|||||......:|||||||:..||.|:|.:|.||:|||||....|.|:.|...|....|.  
Mouse   491 FIRVATVADTDDHRIKVHFDGWSSCYDYWIDADSPDIHPVGWCSKTGHPLQAPLSPAELMEPSET 555

  Fly   986 ----------------------------PAPKPKIQRKRKPKKGAAGGKTPTDNNTQSVKSRTIA 1022
                                        |..:..:.::|......:|..:|              
Mouse   556 GGCPTLGCRGVGHFKKSRYLGTQSGANCPYSEINLSKERIFPDRLSGDTSP-------------- 606

  Fly  1023 LKTTPHLPKLSIKLELKP--------EHHNAAFYENNQPEEEGD----------EEDPDADGDGD 1069
             .|||..|: |.:::.:.        |.|...|.|:::.::|.:          .|:|.......
Mouse   607 -PTTPSFPR-SKRMDTRESSSSPETREKHANNFKEDSEKKKENEVKTSAEAKVVREEPTPSVQQS 669

  Fly  1070 GSTSHISEQSTTQSSSDLIAGSGSGSGSASLVTLATGSNKTVKKSTTKSP--------------- 1119
            .....:.:....|...     ....:..|.....|..:.:..:...|..|               
Mouse   670 QPPQQVQQVQHAQPPQ-----QAQKAPQAQQAQQAQQAQQAPQAPQTPQPQQAPQVQQAQQAPQA 729

  Fly  1120 --------------------------APPTVGRKATSYIANSSAT------------------NN 1140
                                      |.||..:..|...|...:.                  .:
Mouse   730 QQAQQPQQAQQPQQAPPVQQPQQVQQAQPTQQQAQTQQQAQRRSAVFLSFKPPIPCLPLRWEQQS 794

  Fly  1141 KYIPRLADIDSSEPHLELVPDTWNVYDVSQFLR-VNDCTAHCDTFSRNKIDGKRLLQLTKDDIMP 1204
            |.:|.:|.|.:|.      ...|:..:||:|:: :..|..|...|...:|||:..|.:|:.||:.
Mouse   795 KLLPTVAGIPASR------VSKWSTDEVSEFIQSLPGCEEHGKVFKDEQIDGEAFLLMTQTDIVK 853

  Fly  1205 LLGMKVGPALKISDLIAQLK 1224
            ::.:|:||||||.:.|...|
Mouse   854 IMSIKLGPALKIFNSILMFK 873

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SfmbtNP_001137821.1 MBT_dSfmbt_rpt1 564..672 CDD:439109 30/107 (28%)
MBT_dSfmbt_rpt2 674..753 CDD:439112 31/82 (38%)
MBT_dSfmbt_rpt3 798..904 CDD:439115 12/105 (11%)
MBT_dSfmbt_rpt4 905..976 CDD:439118 34/70 (49%)
SAM_Scm-like-4MBT 1160..1226 CDD:188979 23/66 (35%)
L3mbtl3NP_766375.1 Interaction with RBPJ. Required for transcription repressor activity on Notch target genes. /evidence=ECO:0000250|UniProtKB:Q96JM7 1..64 13/47 (28%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 146..223 16/115 (14%)
MBT 1 232..332 33/170 (19%)
MBT_L3MBTL3_rpt1 259..359 CDD:439122 33/137 (24%)
MBT 2 340..439 37/205 (18%)
MBT_L3MBTL3_rpt2 366..458 CDD:439125 39/209 (19%)
MBT 3 448..543 42/95 (44%)
MBT_L3MBTL3_rpt3 467..544 CDD:439128 36/77 (47%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 595..768 23/193 (12%)
SAM_Scm-like-3MBT3,4 808..873 CDD:188981 22/64 (34%)

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