DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Sfmbt and L3mbtl3

DIOPT Version :9

Sequence 1:NP_001137821.1 Gene:Sfmbt / 34709 FlyBaseID:FBgn0032475 Length:1243 Species:Drosophila melanogaster
Sequence 2:NP_001346183.1 Gene:L3mbtl3 / 237339 MGIID:2143628 Length:883 Species:Mus musculus


Alignment Length:1125 Identity:225/1125 - (20%)
Similarity:368/1125 - (32%) Gaps:413/1125 - (36%)


- Green bases have known domain annotations that are detailed below.


  Fly   237 MGTLNG-------NAFGNIMVSTENTSSKQMQRTYSTAKGANSTATTATCSASTSSALRSQRKTR 294
            :|||.|       |.||.:.|.|:.:..:.:::         :||||.....:...|..|...:|
Mouse    25 VGTLPGSDLKFRVNEFGALEVITDESEMESVKK---------ATATTTWMVPTAQDAPTSPPSSR 80

  Fly   295 KIEP----VNRPGLVL----KTPIAYRGNIDPSVIPIQKDGMAVCKRCGAIGVKHTFYTKSRRFC 351
            .:.|    .:.||...    ||.:.:|.....     :.||:..|:.|...| .........::|
Mouse    81 PVFPPAYWTSPPGCPTVFSEKTGVPFRLKEQS-----KADGLQFCENCCQYG-NGDECLSGGKYC 139

  Fly   352 SMACARGELYSLVLNTKMEGDQA-TTSSPDPGAG-------SESADLPGDQQQSQSDIELDLHAA 408
            |..|||   ::...:.|.|.|.. .....||...       |..||...|.::...::| :....
Mouse   140 SQNCAR---HAKDKDQKDERDGGEDNDEEDPKCSRKKKPKLSLKADSKDDGEERDDEME-NKQDG 200

  Fly   409 HIKNANYRFRITDQSKITQLNSFGEPMSMGGDAAANNVQMAADETIAALNGGAVGDATAPGSTEE 473
            .|...:.|.|                ....||:|                      ....|...:
Mouse   201 RILRGSQRAR----------------RKRRGDSA----------------------VLKQGLPPK 227

  Fly   474 GAST--PNSYLSAAPTPKALRLFKDIYPQDDLPQIPKYERLPVPCPQMEKIISIRRRMYDPTHSY 536
            |..|  ..|||                                   :.||.:::..:::....|:
Mouse   228 GKKTWCWASYL-----------------------------------EEEKAVAVPTKLFKEHQSF 257

  Fly   537 DWLPRLSKENFNAAPVTCFPHAPGCEVWDNLGVGMKVEVENTDCDSIEVIQPGQTPTSFWVATIL 601
            .:    :|..|.                    ||||:|..:.|..::           :.|.|:.
Mouse   258 PY----NKNGFK--------------------VGMKLEGVDPDHQAM-----------YCVLTVA 287

  Fly   602 EIKGYKALMSYEGFDTDSHDFWVNLCNAEVHSVGWCATRGKPLIPPRTIEHKYKDWKDFLVGRLS 666
            |:.||:..:.::|: :|.:|||||....::|.||||...|..|.||:..:.:..:|:.:|  :..
Mouse   288 EVCGYRIKLHFDGY-SDCYDFWVNADALDIHPVGWCEKTGHKLRPPKGYKEEEFNWQSYL--KTC 349

  Fly   667 GARTLPSNFYNKINDS-LQSRFRLGLNLECVDKDRISQVRLATVTKIVGKRLFLRYFDSDD---G 727
            .|:..|.:.:...|.: :.|.||:|:.||..||...|.:.:||||.:|..| ||.:||:.|   .
Mouse   350 KAQAAPKSLFENQNITVIPSGFRVGMKLEAADKKSPSVICVATVTDMVDNR-FLVHFDNWDESYD 413

  Fly   728 FWCHEDSPIIHPVGWATTVGHNLAAPQDYLERMLAGREAMIEVHEDDATIELFKMNFTFDEYYSD 792
            :||..:||.||||||                                                  
Mouse   414 YWCESNSPHIHPVGW-------------------------------------------------- 428

  Fly   793 GKTNSFVEGMKLEAVDPLNLSSICPATVMAVLKFGYMMIRIDSYQPDASGSDWFCYHEKSPCIFP 857
                                                                  |...:...|.|
Mouse   429 ------------------------------------------------------CKEHRRTLITP 439

  Fly   858 AGFCSVNNISVTPPNGYDSRTFTWEGYLRDTGAVAAGQHLFHRIIPDHGFEVGMSLECADLMDPR 922
            .|:..|.:             |:|:.||.:|.::.|....| ::.|.|||:..|.||..|..:|.
Mouse   440 PGYSHVKH-------------FSWDKYLEETNSLPAPARAF-KVKPPHGFQKKMKLEAVDKRNPL 490

  Fly   923 LVCVATVARVVGRLLKVHFDGWTDEYDQWLDCESADIYPVGWCVLVNHKLEGPPRVAHQQAPK-- 985
            .:.|||||......:|||||||:..||.|:|.:|.||:|||||....|.|:.|...|....|.  
Mouse   491 FIRVATVADTDDHRIKVHFDGWSSCYDYWIDADSPDIHPVGWCSKTGHPLQAPLSPAELMEPSET 555

  Fly   986 ----------------------------PAPKPKIQRKRKPKKGAAGGKTPTDNNTQSVKSRTIA 1022
                                        |..:..:.::|......:|..:|              
Mouse   556 GGCPTLGCRGVGHFKKSRYLGTQSGANCPYSEINLSKERIFPDRLSGDTSP-------------- 606

  Fly  1023 LKTTPHLPKLSIKLELKP--------EHHNAAFYENNQPEEEGD----------EEDPDADGDGD 1069
             .|||..|: |.:::.:.        |.|...|.|:::.::|.:          .|:|.......
Mouse   607 -PTTPSFPR-SKRMDTRESSSSPETREKHANNFKEDSEKKKENEVKTSAEAKVVREEPTPSVQQS 669

  Fly  1070 GSTSHISEQSTTQSSSDLIAGSGSGSGSASLVTLATGSNKTVKKSTTKSP--------------- 1119
            .....:.:....|...     ....:..|.....|..:.:..:...|..|               
Mouse   670 QPPQQVQQVQHAQPPQ-----QAQKAPQAQQAQQAQQAQQAPQAPQTPQPQQAPQVQQAQQAPQA 729

  Fly  1120 --------------------------APPTVGRKATSYIANSSAT------------------NN 1140
                                      |.||..:..|...|...:.                  .:
Mouse   730 QQAQQPQQAQQPQQAPPVQQPQQVQQAQPTQQQAQTQQQAQRRSAVFLSFKPPIPCLPLRWEQQS 794

  Fly  1141 KYIPRLADIDSSEPHLELVPDTWNVYDVSQFLR-VNDCTAHCDTFSRNKIDGKRLLQLTKDDIMP 1204
            |.:|.:|.|.:|.      ...|:..:||:|:: :..|..|...|...:|||:..|.:|:.||:.
Mouse   795 KLLPTVAGIPASR------VSKWSTDEVSEFIQSLPGCEEHGKVFKDEQIDGEAFLLMTQTDIVK 853

  Fly  1205 LLGMKVGPALKISDLIAQLK 1224
            ::.:|:||||||.:.|...|
Mouse   854 IMSIKLGPALKIFNSILMFK 873

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SfmbtNP_001137821.1 MBT 542..647 CDD:214723 27/104 (26%)
MBT 658..753 CDD:214723 34/98 (35%)
MBT 767..871 CDD:214723 5/103 (5%)
MBT 882..975 CDD:214723 40/92 (43%)
TonB_N <975..1040 CDD:292650 12/94 (13%)
SAM_Scm-like-4MBT 1160..1226 CDD:188979 23/66 (35%)
SAM 1160..1224 CDD:197735 22/64 (34%)
L3mbtl3NP_001346183.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 146..223 16/115 (14%)
MBT 1 232..332 33/170 (19%)
MBT 236..332 CDD:214723 33/166 (20%)
MBT 2 340..439 37/205 (18%)
MBT 343..439 CDD:214723 36/202 (18%)
MBT 3 448..543 42/95 (44%)
MBT 451..543 CDD:214723 40/92 (43%)
zf-C2HC 558..586 CDD:366692 1/27 (4%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 595..768 23/193 (12%)
SAM_Scm-like-3MBT3,4 808..873 CDD:188981 22/64 (34%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C167839856
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3766
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
43.740

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