DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Sfmbt and Samd11

DIOPT Version :10

Sequence 1:NP_001137821.1 Gene:Sfmbt / 34709 FlyBaseID:FBgn0032475 Length:1243 Species:Drosophila melanogaster
Sequence 2:XP_006538909.1 Gene:Samd11 / 231004 MGIID:2446220 Length:558 Species:Mus musculus


Alignment Length:266 Identity:59/266 - (22%)
Similarity:95/266 - (35%) Gaps:91/266 - (34%)


- Green bases have known domain annotations that are detailed below.


  Fly   973 EGPPRVAHQQAPKPAPKPKIQRKRKPKKGAAGGKTPTDNNTQSVKSRTIALKTTPHLPKLSIKLE 1037
            :|||      .|.|...||...:.:.:||:.|                    ..|..||      
Mouse   290 QGPP------GPGPPIPPKESARSRSEKGSLG--------------------VQPSQPK------ 322

  Fly  1038 LKPEHHNAAFYE---NNQPEEEGDEEDPD--ADGDGDGSTSHISEQSTTQSSSDLIAGS------ 1091
               |...|..:.   :.:|.::.|.|||:  |..:|..:.|.:....|......|::||      
Mouse   323 ---ETTGAGLWAQEVSEEPSKDSDGEDPETAAAREGTSTPSQVPAGGTRAEGRGLLSGSTLPPPL 384

  Fly  1092 --GSGSGSAS--LVTLATGSNKTVKKSTTKSPAPPTVGRKATSYIANSSATNNKYIPRLADIDSS 1152
              |...|:.|  ..|...|...|.:::||                             |.|::. 
Mouse   385 PLGFPCGAVSPYFHTGTMGGLFTDEETTT-----------------------------LEDVNK- 419

  Fly  1153 EPHLELVPDTWNVYDVSQFL-RVNDCTAHCDTFSRNKIDGKRLLQLTKDDIMPLLGMKVGPALKI 1216
                      |.|.||..|: .::.|..:...|....|||:.|..||::.::..:|:|:||||||
Mouse   420 ----------WTVDDVCNFVGGLSGCGEYARVFGEQGIDGETLPLLTEEHLLNTMGLKLGPALKI 474

  Fly  1217 SDLIAQ 1222
            ...:|:
Mouse   475 RAQVAK 480

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SfmbtNP_001137821.1 MBT_dSfmbt_rpt1 564..672 CDD:439109
MBT_dSfmbt_rpt2 674..753 CDD:439112
MBT_dSfmbt_rpt3 798..904 CDD:439115
MBT_dSfmbt_rpt4 905..976 CDD:439118 1/2 (50%)
SAM_Scm-like-4MBT 1160..1226 CDD:188979 22/64 (34%)
Samd11XP_006538909.1 SAM_Samd7,11 417..484 CDD:188978 22/75 (29%)
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.