DRSC/TRiP Functional Genomics Resources

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Protein Alignment Sfmbt and L3mbtl2

DIOPT Version :10

Sequence 1:NP_001137821.1 Gene:Sfmbt / 34709 FlyBaseID:FBgn0032475 Length:1243 Species:Drosophila melanogaster
Sequence 2:NP_001276640.1 Gene:L3mbtl2 / 214669 MGIID:2443584 Length:739 Species:Mus musculus


Alignment Length:819 Identity:286/819 - (34%)
Similarity:401/819 - (48%) Gaps:176/819 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly   253 ENTSSKQMQRT----------YSTAKGANSTATTATCS--ASTSSALRSQRKTRKIEPVNRPGLV 305
            |..||:.|:..          |.:.:..||:|.:.:.|  ..:|.|....|:.         |.:
Mouse     9 EAPSSEPMEEEEEDDLDLFGGYDSFRSYNSSAGSESSSYLEESSEAENEDREA---------GEL 64

  Fly   306 LKTPIAYRGNIDPSVIPIQKDGMAVCKRCGAIGVKHTFYTKSRRFCSMACARGELYSLVLNTKME 370
            ..:|:....:.:...:.......|||:.||.:|.:..|::|::||||::|:|.  ||  .|:|..
Mouse    65 PTSPLHLFSSANNRSLDGSGSEPAVCEMCGIVGTREAFFSKTKRFCSVSCSRS--YS--SNSKKA 125

  Fly   371 GDQATTSSPDPGAGSESADLPGDQQQSQSDIELDLHAAHIKNANYRFRITDQSKITQLNSFGEPM 435
            ...|......|                                      |.::|:..        
Mouse   126 SILARLQGKPP--------------------------------------TKKAKVLH-------- 144

  Fly   436 SMGGDAAANNVQMAADETIAALNGGAVGDATAPGSTEEGASTPNSYLSAAPTPKALRLFKDIYPQ 500
                 .||.:.::.|  .:.|...|.:.|.|..|                              |
Mouse   145 -----KAAWSAKIGA--FLHAQGTGQLADGTPTG------------------------------Q 172

  Fly   501 DDLPQIPKYERLPVPCPQMEKIISIRRRMYDPTHSYDWLPRLSKENFNAAPVTCFPHAPGCEVWD 565
            |.|                             ...:||...|...::.||||:||.|.|..:.|:
Mouse   173 DAL-----------------------------VLGFDWGKFLKDHSYKAAPVSCFKHVPLYDQWE 208

  Fly   566 NLGVGMKVEVENTDCDSIEVIQPGQTPTSFWVATILEIKGYKALMSYEGFDTD-SHDFWVNLCNA 629
            ::..||||||.|:|     .:.|.:.   :|:||:::..||:.|:.||||:.| |||||.||...
Mouse   209 DVMKGMKVEVLNSD-----AVLPSRV---YWIATVIQAAGYRVLLRYEGFENDASHDFWCNLGTV 265

  Fly   630 EVHSVGWCATRGKPLIPPRTIEHKYKDWKDFLVGRLSGARTLPSNFYNKINDSLQSRFRLGLNLE 694
            :||.:||||...|.|:|||||..|:.|||.:|:.||.|:||||::|:.|:.:|::..||.|:.||
Mouse   266 DVHPIGWCAINSKILVPPRTIHAKFTDWKSYLMKRLVGSRTLPADFHIKMVESMKYPFRQGMRLE 330

  Fly   695 CVDKDRISQVRLATVTKIVGKRLFLRY--FDSDDGFWCHEDSPIIHPVGWATTVGHNLAAPQDYL 757
            .|||.::|:.|:|.|..::|.||.|.|  .||||.||||..||:||||||:..|||.:       
Mouse   331 VVDKTQVSRTRMAVVDTVIGGRLRLLYEDGDSDDDFWCHMWSPLIHPVGWSRRVGHGI------- 388

  Fly   758 ERMLAGREAMIEVHED------DATIELFKMNFTFDEYYSDGKTNSFVEGMKLEAVDPLNLSSIC 816
              .::.|...:..|..      ||...|||   .....|::|  ..|.|||||||:|||||.|||
Mouse   389 --KMSDRRCDMSHHPTFRKIYCDAVPYLFK---KVRAVYTEG--GWFEEGMKLEAIDPLNLGSIC 446

  Fly   817 PATVMAVLKFGYMMIRIDSYQPDASGSDWFCYHEKSPCIFPAGFCSVNNISVTPPNGYDSRTFTW 881
            .||:..||..||:||.:|. .|...||||||||..|..||||.||..|:|.:|||.||:::.|.|
Mouse   447 VATICKVLLDGYLMICVDG-GPSTDGSDWFCYHASSHAIFPATFCQKNDIELTPPKGYETQPFAW 510

  Fly   882 EGYLRDTGAVAAGQHLFHRIIPDHGFEVGMSLECADLMDPRLVCVATVARVVGRLLKVHFDGWTD 946
            |.||..|.:.||...||:...|:|||:|||.||..|||:|||:|||||.|||.|||.:|||||.:
Mouse   511 ETYLEKTKSKAAPARLFNMDCPNHGFKVGMKLEAVDLMEPRLICVATVKRVVHRLLSIHFDGWDN 575

  Fly   947 EYDQWLDCESADIYPVGWCVLVNHKLEGPPRVAHQQAP---KPAPKPKIQRKRKPKKGAAGGKT- 1007
            |||||:||||.||||||||.|..::|: ||..|....|   |...|.|.::..|.:|.....|| 
Mouse   576 EYDQWVDCESPDIYPVGWCELTGYQLQ-PPVSAEPNTPQKGKDTTKKKKKQFGKKRKRIPSAKTR 639

  Fly  1008 PTDNNTQS--VKSRTIALKTTPHLPKLSIKLELKPEHHN 1044
            |....::.  ::....||..:..:|...|.:.:|.||.:
Mouse   640 PLRQGSKKPLLEDNLEALGVSEPVPDDIIAVCVKEEHQD 678

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SfmbtNP_001137821.1 MBT_dSfmbt_rpt1 564..672 CDD:439109 51/108 (47%)
MBT_dSfmbt_rpt2 674..753 CDD:439112 39/80 (49%)
MBT_dSfmbt_rpt3 798..904 CDD:439115 58/105 (55%)
MBT_dSfmbt_rpt4 905..976 CDD:439118 49/70 (70%)
SAM_Scm-like-4MBT 1160..1226 CDD:188979
L3mbtl2NP_001276640.1 MBT_L3MBTL2_rpt1 207..308 CDD:439111 51/108 (47%)
MBT_L3MBTL2_rpt2 310..393 CDD:439114 39/91 (43%)
MBT 428..518 CDD:459242 53/90 (59%)
MBT_dSfmbt-like_rpt4 534..604 CDD:439090 49/70 (70%)
Blue background indicates that the domain is not in the aligned region.

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