DRSC/TRiP Functional Genomics Resources

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Protein Alignment Sfmbt and mbtr-1

DIOPT Version :9

Sequence 1:NP_001137821.1 Gene:Sfmbt / 34709 FlyBaseID:FBgn0032475 Length:1243 Species:Drosophila melanogaster
Sequence 2:NP_001122542.1 Gene:mbtr-1 / 171624 WormBaseID:WBGene00021661 Length:564 Species:Caenorhabditis elegans


Alignment Length:540 Identity:130/540 - (24%)
Similarity:203/540 - (37%) Gaps:123/540 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly   514 VPCPQMEKIISIRRRMYDPTHSYDWLPRLS---KENFNAAPVTCFPHAPGC----EVWDNLGVGM 571
            :|.||:|             .::.|...|.   ..|....||...   .||    ::..:|..|.
 Worm    55 IPKPQIE-------------GTFTWSDELRCNYDGNTQFLPVEAL---EGCLPLEKLNQHLKPGF 103

  Fly   572 KVEVENTDCDSIEVIQPG-------QTPTSFWVATILEIKGYKALMSYEGFDTDSHDFWVNLCNA 629
            ::||         |::|.       ::|...|...:..:.|:...:.:.| :.:....|.::.:.
 Worm   104 RLEV---------VVRPSLDPSITTKSPEIRWFGEVTAVCGFYVAIKFVG-ELNRRPCWFHMLSE 158

  Fly   630 EVHSVG----------WCATRGKPLIPPRTIEHKYKDWKDFLVGRLSGARTLP----------SN 674
            ::..:|          |...|...|:.|....   |.|:       .|:...|          ..
 Worm   159 DIFDIGSGLKQDPAMKWLQYRPLSLLKPMQCP---KFWR-------RGSTPAPPVPRPTEEILDE 213

  Fly   675 FY----------NKINDSLQ------SRFRLGLNLECVDKDRISQVRLATVTKIVGKRLFLRYFD 723
            |.          .||.|.|:      |||||...:|.::....:::|:|.:.:|:|:||.:....
 Worm   214 FQAELHENRISEPKIFDQLRHLAHRPSRFRLNQRVELLNYLEPTEIRVARILRILGRRLMVMVTA 278

  Fly   724 SD-------------------DGFWCHEDSPIIHPVGWATTVGHNLAAPQDYLERMLAGREAMIE 769
            .|                   ..||..|.|..:.|||:|...|....|.:.|||......|....
 Worm   279 QDYPEDLPSVEAKDRQVQHENVEFWVDESSFFLFPVGFAMINGLRTKATEGYLEHSRRIAEGSGS 343

  Fly   770 VHEDDATIELFKMNFTFDEYYSDGKTNSFVEGMKLEAVDPLN--LSSICPATVMAVLKF-GYMMI 831
            .|:||.|   |:..|......|..|.|....|.|.|.:|||:  ..|.|.||:..:.|. |:::|
 Worm   344 YHKDDVT---FEQLFAGKPDISAEKLNLLKVGQKFELLDPLSDLRQSFCVATIRKICKTPGFLII 405

  Fly   832 RIDSYQPDASGSD--WFCYHEKSPCIFPAGFCSVNNISVTPPNGYDSRTFTWEGYLRDTGAVAAG 894
                 .||.:.||  .|..|..:..:.|.|:.....|.:....|.:...|.|||||::..|....
 Worm   406 -----SPDETESDDESFPIHIDNHFMHPVGYAEKFGIKLDRLAGTEPGKFKWEGYLKEKQAEKIP 465

  Fly   895 QHLFHRIIPD----HGFEVGMSLECADLMDPRLVCVATVARVVGRLLKVHFDGWTDEYDQWLDCE 955
            ..:. |.:|.    |.||.|..||.....:...:..|:|..|.||.:.:.|.||..|:.:..|.:
 Worm   466 DEML-RPLPSKERRHMFEFGRVLEAVGQNETYWISPASVEEVHGRTVLIEFQGWDSEFSELYDMD 529

  Fly   956 SADIYPVGWCVLVNHKLEGP 975
            |.|:.|.|||...|.||..|
 Worm   530 SHDLLPAGWCEFFNFKLRHP 549

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SfmbtNP_001137821.1 MBT 542..647 CDD:214723 21/128 (16%)
MBT 658..753 CDD:214723 29/139 (21%)
MBT 767..871 CDD:214723 31/108 (29%)
MBT 882..975 CDD:214723 32/96 (33%)
TonB_N <975..1040 CDD:292650 1/1 (100%)
SAM_Scm-like-4MBT 1160..1226 CDD:188979
SAM 1160..1224 CDD:197735
mbtr-1NP_001122542.1 MBT 75..164 CDD:302657 16/101 (16%)
MBT 217..326 CDD:214723 26/108 (24%)
MBT 374..439 CDD:280910 21/69 (30%)
MBT 453..540 CDD:214723 28/87 (32%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C160167439
Domainoid 1 1.000 70 1.000 Domainoid score I6229
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 1 0.950 - 0 Normalized mean entropy S5675
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0002222
OrthoInspector 1 1.000 - - otm14308
orthoMCL 1 0.900 - - OOG6_105853
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X1465
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
87.690

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