DRSC/TRiP Functional Genomics Resources

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Protein Alignment Sfmbt and mbtr-1

DIOPT Version :10

Sequence 1:NP_001137821.1 Gene:Sfmbt / 34709 FlyBaseID:FBgn0032475 Length:1243 Species:Drosophila melanogaster
Sequence 2:NP_001122542.1 Gene:mbtr-1 / 171624 WormBaseID:WBGene00021661 Length:564 Species:Caenorhabditis elegans


Alignment Length:540 Identity:130/540 - (24%)
Similarity:203/540 - (37%) Gaps:123/540 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly   514 VPCPQMEKIISIRRRMYDPTHSYDWLPRLS---KENFNAAPVTCFPHAPGC----EVWDNLGVGM 571
            :|.||:|             .::.|...|.   ..|....||...   .||    ::..:|..|.
 Worm    55 IPKPQIE-------------GTFTWSDELRCNYDGNTQFLPVEAL---EGCLPLEKLNQHLKPGF 103

  Fly   572 KVEVENTDCDSIEVIQPG-------QTPTSFWVATILEIKGYKALMSYEGFDTDSHDFWVNLCNA 629
            ::||         |::|.       ::|...|...:..:.|:...:.:.| :.:....|.::.:.
 Worm   104 RLEV---------VVRPSLDPSITTKSPEIRWFGEVTAVCGFYVAIKFVG-ELNRRPCWFHMLSE 158

  Fly   630 EVHSVG----------WCATRGKPLIPPRTIEHKYKDWKDFLVGRLSGARTLP----------SN 674
            ::..:|          |...|...|:.|....   |.|:       .|:...|          ..
 Worm   159 DIFDIGSGLKQDPAMKWLQYRPLSLLKPMQCP---KFWR-------RGSTPAPPVPRPTEEILDE 213

  Fly   675 FY----------NKINDSLQ------SRFRLGLNLECVDKDRISQVRLATVTKIVGKRLFLRYFD 723
            |.          .||.|.|:      |||||...:|.::....:::|:|.:.:|:|:||.:....
 Worm   214 FQAELHENRISEPKIFDQLRHLAHRPSRFRLNQRVELLNYLEPTEIRVARILRILGRRLMVMVTA 278

  Fly   724 SD-------------------DGFWCHEDSPIIHPVGWATTVGHNLAAPQDYLERMLAGREAMIE 769
            .|                   ..||..|.|..:.|||:|...|....|.:.|||......|....
 Worm   279 QDYPEDLPSVEAKDRQVQHENVEFWVDESSFFLFPVGFAMINGLRTKATEGYLEHSRRIAEGSGS 343

  Fly   770 VHEDDATIELFKMNFTFDEYYSDGKTNSFVEGMKLEAVDPLN--LSSICPATVMAVLKF-GYMMI 831
            .|:||.|   |:..|......|..|.|....|.|.|.:|||:  ..|.|.||:..:.|. |:::|
 Worm   344 YHKDDVT---FEQLFAGKPDISAEKLNLLKVGQKFELLDPLSDLRQSFCVATIRKICKTPGFLII 405

  Fly   832 RIDSYQPDASGSD--WFCYHEKSPCIFPAGFCSVNNISVTPPNGYDSRTFTWEGYLRDTGAVAAG 894
                 .||.:.||  .|..|..:..:.|.|:.....|.:....|.:...|.|||||::..|....
 Worm   406 -----SPDETESDDESFPIHIDNHFMHPVGYAEKFGIKLDRLAGTEPGKFKWEGYLKEKQAEKIP 465

  Fly   895 QHLFHRIIPD----HGFEVGMSLECADLMDPRLVCVATVARVVGRLLKVHFDGWTDEYDQWLDCE 955
            ..:. |.:|.    |.||.|..||.....:...:..|:|..|.||.:.:.|.||..|:.:..|.:
 Worm   466 DEML-RPLPSKERRHMFEFGRVLEAVGQNETYWISPASVEEVHGRTVLIEFQGWDSEFSELYDMD 529

  Fly   956 SADIYPVGWCVLVNHKLEGP 975
            |.|:.|.|||...|.||..|
 Worm   530 SHDLLPAGWCEFFNFKLRHP 549

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SfmbtNP_001137821.1 MBT_dSfmbt_rpt1 564..672 CDD:439109 19/124 (15%)
MBT_dSfmbt_rpt2 674..753 CDD:439112 27/113 (24%)
MBT_dSfmbt_rpt3 798..904 CDD:439115 31/110 (28%)
MBT_dSfmbt_rpt4 905..976 CDD:439118 26/71 (37%)
SAM_Scm-like-4MBT 1160..1226 CDD:188979
mbtr-1NP_001122542.1 MBT 96..>164 CDD:459242 11/77 (14%)
MBT 217..326 CDD:214723 26/108 (24%)
MBT_dSfmbt-like_rpt3 369..460 CDD:439089 29/95 (31%)
MBT 479..549 CDD:459242 25/69 (36%)
Blue background indicates that the domain is not in the aligned region.

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