DRSC/TRiP Functional Genomics Resources

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Protein Alignment Sfmbt and Samd11

DIOPT Version :9

Sequence 1:NP_001137821.1 Gene:Sfmbt / 34709 FlyBaseID:FBgn0032475 Length:1243 Species:Drosophila melanogaster
Sequence 2:XP_038965039.1 Gene:Samd11 / 102549710 RGDID:1310271 Length:844 Species:Rattus norvegicus


Alignment Length:923 Identity:175/923 - (18%)
Similarity:275/923 - (29%) Gaps:340/923 - (36%)


- Green bases have known domain annotations that are detailed below.


  Fly   448 MAADETIAALNGGAVGDATAPGSTEEGAST---PNSYLSAAPTPKALRLFKD----IYPQDDLPQ 505
            :|.....|||...|...|:|.|.....|.:   |.:|||.......|.|.:|    .|.......
  Rat    37 LAPQPAAAALPSAASLPASASGYEALLAPSLCPPRAYLSLQEATPHLYLHRDPPAFQYFSASAAA 101

  Fly   506 IPKYERL---PVPCPQME-----KIISIRRRMY---DPT--HSYDWL-PR--------------- 541
            .|.::.|   ..||.::|     .::.:|:...   .|:  |..:|| |.               
  Rat   102 APDFQPLIDNGEPCIEVECGDNRALLYVRKLCQGSKGPSIRHRGEWLTPNEFQFVSGRETAKDWK 166

  Fly   542 -------------LSKENFNAAPVTCFPHAPGCEVWDNLGVGMKVEVENTDCDSIEVIQPGQTPT 593
                         :||......|..|  ..|||.:...:..|...:...........::..:|| 
  Rat   167 RSIRHKGKSLKTLMSKGILRVHPPIC--DCPGCRISSPVNRGRLADKRTVTLPPTHALKKERTP- 228

  Fly   594 SFWVATILEIKGYKALMSYEGFDTDS----------------------------HDFW-VNL--- 626
                             |:...|.||                            |..| ||:   
  Rat   229 -----------------SFSASDGDSDGSGPACGQQLSLKQEDDPHFHIMKRRVHTHWDVNISFR 276

  Fly   627 ---CN---------AEVHSVGWCATRGKPLIPPRTIEHKYKDWKDFLVGRLSGARTLPSNFYNKI 679
               |:         :.||       |.:.|:.|....|     .||..|.:              
  Rat   277 ETSCSQDNDLPTLISSVH-------RSRCLVMPEHPRH-----CDFQRGNV-------------- 315

  Fly   680 NDSLQSRFRLGLNLECVDKDRISQVRLATVTKIVGKRLFLRYFDSDDGFWCHEDSPIIHPVGWAT 744
                                   ::.|.....::||||...|..||    |..:..........|
  Rat   316 -----------------------EIGLGPGGDLLGKRLSCPYITSD----CSSEKKARSKAPQET 353

  Fly   745 TVGHNL---AAPQD-YLERMLAGREA------------------MIEVHEDDAT--------IEL 779
            .:...|   .||:| |.:.|.|..||                  ::.|.::.||        :|:
  Rat   354 LLLPELESTMAPEDHYHQLMSALSEAGPFEETQRLYHLGIPSHDLLRVRQEVATATLRGPSSLEV 418

  Fly   780 FKMNFTFDEYYSDG-----------KTNSFVEGMKLEAVDPLNLSSICPATVMAVLKFGYMMIRI 833
            ...:.|.......|           .|.||.| .:|....||......|...|            
  Rat   419 HLPSSTAGHRRKQGLVQHREGTVPAATTSFSE-RELSQPPPLLPPQNAPHITM------------ 470

  Fly   834 DSYQPDASGSDWFCYHEKSPCI-FPAGFCSVNNISVTPPNGYDSRTFTWEGYLRDTGA--VAAGQ 895
                    ||     |.:.|.. .|...|.      ||  ||        .:|....|  :|..|
  Rat   471 --------GS-----HLRPPFFGMPTALCQ------TP--GY--------SFLPSAQAEMLARQQ 506

  Fly   896 HLFHRIIPDHGFEVGMSLECADLMDPRLVCVATVARVVGRLLKVHFDGWTDEYDQWLDCESADIY 960
            .|..:       :....||.::|:..:.:......:::...:.:|.....||..:          
  Rat   507 ELLRK-------QSLARLEMSELLRQKELGSVHRPQLLAPEVALHIPEGPDELQR---------- 554

  Fly   961 PVGWCVLVNH----KLEGPPRVAHQQAPKPAPKPKIQRKR----KPKKGAAGGKTPTDNNTQSVK 1017
             .|..:::.|    .|..||     |.| |.|.|.|..|.    :.:||:.|             
  Rat   555 -RGSMLVLKHGSAPLLALPP-----QGP-PGPGPPIPAKESARSRSQKGSLG------------- 599

  Fly  1018 SRTIALKTTPHLPKLSIKLELKPEHHNAAFYENNQPEEEGDEEDPD-ADGDGDGST-SHISEQST 1080
                |....|..||.:.:..|..:.      .:.:|.::.|.|||: |...|..|| |.:....|
  Rat   600 ----AASAQPSEPKETTRAGLWAQD------VSEEPSKDSDGEDPEIAAARGGASTPSQVPAGGT 654

  Fly  1081 TQSSSDLIAGSGSGSGSASLVTLATGSNKTVKKSTTKSPAPPTVGRKATSYIANSSATNNKYIPR 1145
            ......|::|                       ||...|.|......|.|...::......:   
  Rat   655 RAEGKGLLSG-----------------------STLPPPLPLGFPCGAVSPYFHTGTMGGLF--- 693

  Fly  1146 LADIDSSEPHLELVPDTWNVYDVSQFL-RVNDCTAHCDTFSRNKIDGKRLLQLTKDDIMPLLGMK 1209
             .|.:::.|  |.: :.|.|.||..|: .::.|..:...|....|||:.|..||::.::..:|:|
  Rat   694 -TDEETTGP--EDI-NKWTVDDVCNFVGGLSGCGEYARVFREQGIDGETLPLLTEEHLLNTMGLK 754

  Fly  1210 VGPALKISDLIAQ 1222
            :||||||...:|:
  Rat   755 LGPALKIRAQVAK 767

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SfmbtNP_001137821.1 MBT 542..647 CDD:214723 23/148 (16%)
MBT 658..753 CDD:214723 14/97 (14%)
MBT 767..871 CDD:214723 22/123 (18%)
MBT 882..975 CDD:214723 14/98 (14%)
TonB_N <975..1040 CDD:292650 17/68 (25%)
SAM_Scm-like-4MBT 1160..1226 CDD:188979 22/64 (34%)
SAM 1160..1224 CDD:197735 22/64 (34%)
Samd11XP_038965039.1 SAND 113..185 CDD:396076 11/71 (15%)
SAM_Samd7,11 704..771 CDD:188978 22/65 (34%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C166343713
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.840

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