DRSC/TRiP Functional Genomics Resources

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Protein Alignment Sfmbt and l3mbtl2

DIOPT Version :10

Sequence 1:NP_001137821.1 Gene:Sfmbt / 34709 FlyBaseID:FBgn0032475 Length:1243 Species:Drosophila melanogaster
Sequence 2:XP_004913859.2 Gene:l3mbtl2 / 100490882 XenbaseID:XB-GENE-985657 Length:744 Species:Xenopus tropicalis


Alignment Length:855 Identity:292/855 - (34%)
Similarity:413/855 - (48%) Gaps:218/855 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly   253 ENTSSKQMQRTYSTAKGANSTATTATCSASTSSALRSQRKTRKIEPVNRPGLVLKTPIAYRGNID 317
            ||..|..:|::.|:|..||                    :....||                   
 Frog    41 ENEGSSSLQQSSSSANKAN--------------------EENSAEP------------------- 66

  Fly   318 PSVIPIQKDGMAVCKRCGAIGVKHTFYTKSRRFCSMACARGELYSLVLNTKMEGDQATTSSPDPG 382
                       |:|:.||.:|.:.||::|::|||:::|:|.  ||  .|:|              
 Frog    67 -----------AICEMCGIVGTRGTFFSKTKRFCNVSCSRS--YS--SNSK-------------- 102

  Fly   383 AGSESADLPGDQQQSQSDIELDLHAAHIKNANYRFRITDQSKITQLNSFGEPMSMGGDAAANNVQ 447
            ..|..|.|.|.....::.:   ||.|. .:|..:..:..||.       |:|:            
 Frog   103 KASILARLQGKPPTRKAKV---LHKAS-WSAKIKAFLNSQST-------GQPV------------ 144

  Fly   448 MAADETIAALNGGAVGDATAPGSTEEGASTPNSYLSAAPTPKALRLFKDIYPQDDLPQIPKYERL 512
                            |.|..|                              ||.|         
 Frog   145 ----------------DGTPTG------------------------------QDAL--------- 154

  Fly   513 PVPCPQMEKIISIRRRMYDPTHSYDWLPRLSKENFNAAPVTCFPHAPGCEVWDNLGVGMKVEVEN 577
                                ...:||...:::.||.|||||||.|.|.|:.||::..|:|||..|
 Frog   155 --------------------ALGFDWGKYITEGNFEAAPVTCFRHVPLCDQWDDIVEGIKVESLN 199

  Fly   578 TDCDSIEVIQPGQTPTSFWVATILEIKGYKALMSYEGFDTD-SHDFWVNLCNAEVHSVGWCATRG 641
            ||     .:.|.:.   :|::::::|.|||||:.||||:.| ||::|.||...|:|.:||||...
 Frog   200 TD-----AVLPSRV---YWISSVVKIAGYKALLQYEGFEEDSSHNYWCNLGTVEIHPIGWCAVNS 256

  Fly   642 KPLIPPRTIEHKYKDWKDFLVGRLSGARTLPSNFYNKINDSLQSRFRLGLNLECVDKDRISQVRL 706
            |.|:||::|..|:.||:::|:.:|.|:.|:|::|:.|:.:|.:..||.|:.||.|||.::|::|.
 Frog   257 KILVPPQSILSKFTDWREYLMKKLVGSHTIPADFHVKMAESFRCPFRQGMRLEAVDKMKMSRMRS 321

  Fly   707 ATVTKIVGKRLFLRYFDSD--DGFWCHEDSPIIHPVGWATTVGHNLAAPQDYLERMLAGREAMIE 769
            |.|..::|.|:.|.|.|.:  |.||||..||:|||||||..||||:..|.  |:|..........
 Frog   322 AVVDTVIGGRMRLLYEDGEKNDDFWCHMTSPLIHPVGWARKVGHNIKPPD--LKRFEMSSHPTFR 384

  Fly   770 VHEDDATIELFK-MNFTFDEYYSDGKTNSFVEGMKLEAVDPLNLSSICPATVMAVLKFGYMMIRI 833
            ....||...||| |...:.|      ...|.|||||||||||||.:||.|||..:|..||:|:..
 Frog   385 KVYCDAVPHLFKQMRVAYPE------GTWFEEGMKLEAVDPLNLGNICVATVCKILLDGYLMVGF 443

  Fly   834 DSYQPDASGSDWFCYHEKSPCIFPAGFCSVNNISVTPPNGYDSRTFTWEGYLRDTGAVAAGQHLF 898
            || .|.|.||:|||||..||.|||.|||...:|.:|.|.||...||:|:.||..||:.||...||
 Frog   444 DS-APSADGSEWFCYHASSPSIFPVGFCHQYDIELTQPPGYTKETFSWDEYLEKTGSKAAPARLF 507

  Fly   899 HRIIPDHGFEVGMSLECADLMDPRLVCVATVARVVGRLLKVHFDGWTDEYDQWLDCESADIYPVG 963
            :...|:||||.||.||..|||:|||:||||:.|||.|||:::||||..|||||:||||.||||||
 Frog   508 NHDCPNHGFEPGMKLEAVDLMEPRLICVATITRVVQRLLRINFDGWDVEYDQWVDCESPDIYPVG 572

  Fly   964 WCVLVNHKLEGPPRVAHQQAPKPAPKPKIQRKRKPKKGAAGGKTPTDNNTQSVKS--RTIALKTT 1026
            ||.|:.::|:.|.    :..||..||||   :.|.||.||.||. ...|.|..||  :|.:..:|
 Frog   573 WCELLGYQLQPPV----EDEPKEEPKPK---EVKKKKKAAFGKR-KKKNPQGKKSDKKTRSTDST 629

  Fly  1027 PHLPKLSIKLELKPEHHNAAFYENNQPEEEGDEEDPDADGDGDGSTSHISEQSTTQSSSDLIAGS 1091
            .::....:: |.|.:::.........||   |:.||        :..|:.|         ::..:
 Frog   630 KNISNQLLE-EPKRKYNKKTKAVGKTPE---DKNDP--------ANKHVME---------VVPST 673

  Fly  1092 GSGSGSASLV 1101
            .:|..|..||
 Frog   674 SAGKNSVDLV 683

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SfmbtNP_001137821.1 MBT_dSfmbt_rpt1 564..672 CDD:439109 45/108 (42%)
MBT_dSfmbt_rpt2 674..753 CDD:439112 38/80 (48%)
MBT_dSfmbt_rpt3 798..904 CDD:439115 58/105 (55%)
MBT_dSfmbt_rpt4 905..976 CDD:439118 47/70 (67%)
SAM_Scm-like-4MBT 1160..1226 CDD:188979
l3mbtl2XP_004913859.2 MBT_L3MBTL2_rpt1 186..287 CDD:439111 45/108 (42%)
MBT_L3MBTL2_rpt2 289..372 CDD:439114 39/84 (46%)
MBT 408..498 CDD:459242 52/90 (58%)
MBT_L3MBTL2_rpt4 511..585 CDD:439120 48/73 (66%)
Blue background indicates that the domain is not in the aligned region.

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