DRSC/TRiP Functional Genomics Resources

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Protein Alignment Sfmbt and phc2

DIOPT Version :10

Sequence 1:NP_001137821.1 Gene:Sfmbt / 34709 FlyBaseID:FBgn0032475 Length:1243 Species:Drosophila melanogaster
Sequence 2:NP_001106410.2 Gene:phc2 / 100127572 XenbaseID:XB-GENE-996998 Length:804 Species:Xenopus tropicalis


Alignment Length:344 Identity:73/344 - (21%)
Similarity:117/344 - (34%) Gaps:121/344 - (35%)


- Green bases have known domain annotations that are detailed below.


  Fly   967 LVNHKLEGPPRVAHQQAPKPAPK------PKIQR--------KRKPKKGAAGGKTP-TDNNTQSV 1016
            ::.|.:||   ...|:..:|.|.      |::.|        :|.| :|....|.| .|:||.:.
 Frog   494 ILTHVIEG---FVIQEGAQPFPSHRSRAAPEVGRSSLLIGAHERYP-QGLLAEKVPQQDSNTTTT 554

  Fly  1017 KSRTIALKTTPHLPKLSIKLELKPEHHNAAFYENNQPEEEGDEEDPDADGDGD------------ 1069
                    ||                       :::.||......||:.||||            
 Frog   555 --------TT-----------------------DSEMEETFVPGFPDSKGDGDPPKLKCELCGRV 588

  Fly  1070 -----------------------GSTSHISEQSTTQSSSDLIAGSGSGSGSAS---LVTLATGSN 1108
                                   |.|..:......:|......|:......|.   |.:::|...
 Frog   589 DFEYKFKRSKRFCSMACAKRYNVGCTKRVGLFHPDRSKLQKPTGAKHARRRAQKGPLQSVSTDPK 653

  Fly  1109 KTVKKSTT-----KSPAPPTVGRKATSYIANSSATNNKYIPRLADIDSS--------EPHLELV- 1159
            |.|..|..     ..|||..:....:...::..:.|:.|...|:.:.:|        |.:||.. 
 Frog   654 KQVPASAPPIAPGPVPAPSALKHSNSQEDSSRCSDNSSYEEPLSPLSASSSLSRPRPERNLEAPP 718

  Fly  1160 ------------------PDTWNVYDVSQFLR-VNDCTAHCDTFSRNKIDGKRLLQLTKDDIMPL 1205
                              |..|||.||.:|:| :..|....:.|...:|||:.||.|.:|.:|..
 Frog   719 PLHSRDHIALNQDFLPSNPTKWNVEDVYEFIRSLPGCQDISEEFRAQEIDGQALLLLKEDHLMSA 783

  Fly  1206 LGMKVGPALKISDLIAQLK 1224
            :.:|:|||||:...|:.||
 Frog   784 MNIKLGPALKLYARISMLK 802

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SfmbtNP_001137821.1 MBT_dSfmbt_rpt1 564..672 CDD:439109
MBT_dSfmbt_rpt2 674..753 CDD:439112
MBT_dSfmbt_rpt3 798..904 CDD:439115
MBT_dSfmbt_rpt4 905..976 CDD:439118 3/8 (38%)
SAM_Scm-like-4MBT 1160..1226 CDD:188979 27/66 (41%)
phc2NP_001106410.2 PHA03247 <27..457 CDD:223021
PHC2_SAM_assoc 610..735 CDD:465202 20/124 (16%)
SAM_Ph1,2,3 735..803 CDD:188976 27/68 (40%)
Blue background indicates that the domain is not in the aligned region.

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