DRSC/TRiP Functional Genomics Resources

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Protein Alignment Sfmbt and samd11

DIOPT Version :10

Sequence 1:NP_001137821.1 Gene:Sfmbt / 34709 FlyBaseID:FBgn0032475 Length:1243 Species:Drosophila melanogaster
Sequence 2:XP_012821355.1 Gene:samd11 / 100125007 XenbaseID:XB-GENE-5956759 Length:916 Species:Xenopus tropicalis


Alignment Length:957 Identity:169/957 - (17%)
Similarity:292/957 - (30%) Gaps:355/957 - (37%)


- Green bases have known domain annotations that are detailed below.


  Fly   490 ALRLFKDIYPQDDLPQIPKYERLPVPC-----PQMEKIISIR-RRMY----DPTHSYDWLPRLSK 544
            ||..|..  |.|   .||.|....:|.     |..|.:.|.. .|.|    :|.|.......:..
 Frog    15 ALAAFNQ--PMD---TIPGYLAAAIPVVTPHPPAYEHLFSPHAHRAYLGLPEPHHHPPLPDDMML 74

  Fly   545 ENFNAAP--VTCFPHAPGCEVWDNLGVGMKVEVENTDCDSIEVIQPGQTPTSFWVATILEIKGYK 607
            |.|::.|  ...|.....|           :|||   |        |:.....::..:.:  |.|
 Frog    75 ERFSSIPDFQPLFDQGEPC-----------IEVE---C--------GENKALLYIQKLCQ--GSK 115

  Fly   608 A-LMSYEGFDTDSHDFWVNLCNAEVHSVGWCATRGKPLIPPRTIEHKYKDWKDFLV--------- 662
            . .:.|.|.....::|  ...:....:..|          .|:|.||.|..|..:.         
 Frog   116 GPSIRYRGEWLTPNEF--QFVSGRETAKDW----------KRSIRHKGKSLKTLMSKGILQVHPP 168

  Fly   663 ---------------GRLSGARTL-----------PSNFYNKINDSLQSRFRLGLNLECVDKDRI 701
                           |||:..||:           |.:.::.:.||.:.            ....
 Frog   169 ICDCPGCRISSPVNRGRLAEKRTIPLPPSRIPKKEPCSVFSVVEDSPKG------------NGEH 221

  Fly   702 SQVRLATVTKI-VGKRLFLRYFDSDDGFWCHEDSPIIHPVGWATTVGHNLAAPQDYLERM----- 760
            :.|:|.....| :.||....::|.:..|......|:|.    ...|.|    |:|.::.:     
 Frog   222 TSVKLEEDLHISIMKRRIRAHWDLNISFQDTSCRPVIQ----RERVNH----PKDCMDGIFLQTT 278

  Fly   761 -----LAGRE-----AMIEVHEDDATIELFKMNFTFDEYYSDGKTNSFVEGMKLEAVDPLNLSSI 815
                 |||||     .:..:|::...:.....|.......:...|:.|: |.|.|. .| |.:|.
 Frog   279 APLMGLAGRENELSSIITSLHQNHQLVMPENQNKRNSHQLTFPSTDDFL-GKKREC-SP-NSNSE 340

  Fly   816 CPATVMAVLKFGYMMIRIDSYQPDASGSDWFCYHEKSPCIFPAGFCSVNNISVTP---------- 870
            ||               ::|.:.          ..:||          ...|.||          
 Frog   341 CP---------------LESKKA----------RSESP----------KETSQTPLLEERLAQMT 370

  Fly   871 PNGYDSRTFTWEGYLRDTGAVAAGQHLFHRI-----IPDHGFEVGMSLECADLMDPRLVCVATVA 930
            |..:..|..:   .|.:.|:....|...:::     :|.|.          ||:..|....|.|.
 Frog   371 PEEHYRRMMS---ALNEHGSFEEQQQRLYQLANTMAVPTHN----------DLLRARQEVAAAVV 422

  Fly   931 RVVGRLLKVHFDGWTDEYDQ--------------WLDCESADIYPVGWCVLVNHKLEGPPRVAHQ 981
            |... .::.|....::...|              :.|.|            ::|.   ||.::.|
 Frog   423 RNPA-AMEAHIPSSSNSSSQRRKQGLPQHRDTSHFTDRE------------MSHP---PPLLSPQ 471

  Fly   982 QAPKPAPKPKIQRKRKPKKGAAGG--KTPTDNNTQSVKSRTIA----LKTTPHLPKLSIKLE--- 1037
            .||..|..|.:   |.|..|....  :||.....|..::...|    :....:|.:|.:..|   
 Frog   472 NAPHIALGPHL---RPPFLGVPSALCQTPGYGFLQPAQAEIFARQQEMLRKQNLARLEMSAEIIR 533

  Fly  1038 -----------------------LKPEH-----------------------------HN------ 1044
                                   |.|:|                             ||      
 Frog   534 QKELENLHRQRLLAGDPLTLHPGLPPDHPALRNVHELPEGHPLREELSRRNAMLVLRHNNTPLLS 598

  Fly  1045 -----------------------AAFYENNQPE-------------------EEGDEEDPDADGD 1067
                                   .:.:..|:|:                   |..|||..|::.:
 Frog   599 LNHQGVSSAPPPKESGSGRRSSRKSVHHRNEPQVNQGEAKELLDQHCRDGASEGNDEEMKDSESE 663

  Fly  1068 GDGSTSHI-SEQSTTQSSSDLIAGSGSGSGSASL-VTLATGSNKTVKKSTTKSPA---PPTVGRK 1127
            .:.....: :::..:.||.:|..|..:..||.|: .:....:::::....::||.   .|.:.:.
 Frog   664 AEEKADSLRADRGASSSSHELHEGKDTLKGSESIKESNDAQTHQSLPCGPSESPTHLLGPGINKG 728

  Fly  1128 ATSYIANSSA------------TNNKYIPRLA----DIDSSEPHLELVPDTWNVYDVSQFL-RVN 1175
            .:.|:.:||.            ..|.|....|    .:|..|..:......|.|.||..|: .::
 Frog   729 ESKYLPSSSVPPPQPLPFGFPYAVNPYFHTGAMGGLFLDGEESVVLEDLSKWTVEDVCSFVGSLS 793

  Fly  1176 DCTAHCDTFSRNKIDGKRLLQLTKDDIMPLLGMKVGPALKISDLIAQ 1222
            .|..:...|..:.|||:.|..||::.::..:|:|:||||||...:|:
 Frog   794 GCAEYTQVFREHSIDGETLPLLTEEHLLNNMGLKLGPALKIRAQVAK 840

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SfmbtNP_001137821.1 MBT_dSfmbt_rpt1 564..672 CDD:439109 22/143 (15%)
MBT_dSfmbt_rpt2 674..753 CDD:439112 13/79 (16%)
MBT_dSfmbt_rpt3 798..904 CDD:439115 20/120 (17%)
MBT_dSfmbt_rpt4 905..976 CDD:439118 12/84 (14%)
SAM_Scm-like-4MBT 1160..1226 CDD:188979 22/64 (34%)
samd11XP_012821355.1 SAND 88..163 CDD:460167 18/110 (16%)
SAM_Samd7,11 777..844 CDD:188978 22/64 (34%)

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