DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment DnaJ-H and dnaja4.2

DIOPT Version :9

Sequence 1:NP_001260431.1 Gene:DnaJ-H / 34707 FlyBaseID:FBgn0032474 Length:440 Species:Drosophila melanogaster
Sequence 2:NP_001016990.1 Gene:dnaja4.2 / 549744 XenbaseID:XB-GENE-5891666 Length:401 Species:Xenopus tropicalis


Alignment Length:398 Identity:137/398 - (34%)
Similarity:218/398 - (54%) Gaps:19/398 - (4%)


- Green bases have known domain annotations that are detailed below.


  Fly     7 YDVLKVAPDATDEEIKKNYRKLAKEFHPDKNPDAGDKFKEISFAYEVLSDPEKRRIYDRYGLKGL 71
            ||:|.|.|.|:.|||::.:|:||.::||||||.||:|||:||.|||:|.|..||.:|||.|...|
 Frog     8 YDLLGVRPSASSEEIRRAFRRLALKYHPDKNPSAGEKFKQISKAYEILHDSHKRELYDRGGEDAL 72

  Fly    72 QEGAEG----FSDASEFFAQWF-PFDRVSSEGRGRRNGKVVV-KVELTLEEIYVGGMKKKVEYNR 130
            ...:.|    |....:.|..:| ...||..:  ..|.||.|. .:.::||::| .|..:|:...:
 Frog    73 TGNSTGCRSAFDSPLDIFNLFFGGSTRVHHQ--AERKGKSVAHHLPVSLEDLY-NGATRKLSLQK 134

  Fly   131 QKLCSKCNGDGGPKEAHESCETCGGAG-RAAAFTFMG--LSPFDTTCPTCDGRGFTIRDDKKCSP 192
            ..:|:||.|.|..:.:...|..|.|.| .....|.:.  :|...|.|..|:|:|..||...:|..
 Frog   135 NAICAKCKGSGAKQGSITKCPKCQGCGIEVHLLTHIPGVMSQIQTPCSECNGKGECIRLRDRCQV 199

  Fly   193 CQGSGFVEQKMKRDLVVERGAPHMLKVPFANEGHQMRGGEFGDLIVVISQMEHPIFQRRHANLYM 257
            |.|...:.:|....:.:::|.....|:.|..||.|..|.:.||:|:|:.|..||:|||:..:|.|
 Frog   200 CSGRKIIREKKILTVHIDKGMKSGQKIIFHEEGDQAPGLQPGDIIIVLDQKSHPVFQRKGHDLVM 264

  Fly   258 RDLEINITEALCGYSHCFKHLDGRNVCLRTYPGEVLQHNQIKMVRGSGMPVFNKATDSGDLYMKF 322
            : :||.:.:||||.....|.||||.:.:.:.||||::...||.:...|||::....:.|.|.::|
 Frog   265 K-MEIQLADALCGCRQSIKTLDGRTLLVTSQPGEVIKPGDIKCIPKEGMPIYRNLYEKGSLIIQF 328

  Fly   323 KVKFPDNDFATAPQLAMLEDLLPPRQPIVIPKNAEEVQMTDYKP------QPRQQEDEDGQSSHF 381
            ::.||::.:.....|..|:.|.|.|:..:|.::.|||.:.:|.|      :.||:..|:.::...
 Frog   329 QIHFPESGWLNGEHLTQLQGLFPSREEPIITEDMEEVSLAEYNPYEDQKQRGRQEAYEEDEAVPL 393

  Fly   382 EGVQCQTA 389
            :.|||||:
 Frog   394 QRVQCQTS 401

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
DnaJ-HNP_001260431.1 DnaJ 1..363 CDD:223560 127/364 (35%)
DnaJ 5..64 CDD:278647 32/56 (57%)
DnaJ_C 106..329 CDD:199909 72/226 (32%)
DnaJ_zf 134..197 CDD:199908 21/65 (32%)
dnaja4.2NP_001016990.1 PTZ00037 2..398 CDD:240236 133/393 (34%)
DnaJ 6..65 CDD:278647 32/56 (57%)
DnaJ_C 113..335 CDD:199909 71/223 (32%)
DnaJ_zf 138..204 CDD:199908 21/65 (32%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1012379at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.010

Return to query results.
Submit another query.