DRSC/TRiP Functional Genomics Resources

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Protein Alignment DnaJ-H and dnaja3b

DIOPT Version :9

Sequence 1:NP_001260431.1 Gene:DnaJ-H / 34707 FlyBaseID:FBgn0032474 Length:440 Species:Drosophila melanogaster
Sequence 2:NP_958499.1 Gene:dnaja3b / 394242 ZFINID:ZDB-GENE-040115-3 Length:474 Species:Danio rerio


Alignment Length:418 Identity:119/418 - (28%)
Similarity:177/418 - (42%) Gaps:86/418 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 NLYDVLKVAPDATDEEIKKNYRKLAKEFHPDKN---PDAGDKFKEISFAYEVLSDPEKRRIYDRY 66
            :.|:||.|...|:.:||||.|.:|||::|||.|   |||.:||.:::.|||.|||..||:.||.|
Zfish    86 DFYEVLGVPRTASQKEIKKAYYQLAKKYHPDTNPDDPDAKEKFAKLAEAYETLSDELKRKQYDTY 150

  Fly    67 GLKGLQEGAEGFS---------DASEFFAQWFPFDRVSSEGRGRRNGKVVVKVELTLEEIYV--- 119
            |..|......|..         |..|.|.:.|. :.....|.|..|.......|..:|..::   
Zfish   151 GSAGPSASGTGQQQYWRGSANVDPEELFRKIFG-EFAGGRGFGDINSMFDQAPEFVMELSFMQAA 214

  Fly   120 GGMKKKVEYNRQKLCSKCNG---DGGPKEAHESCETCGGAGRAAAFTFMGLSPF--DTTCPTCDG 179
            .|:.|::..|....|.:|:|   :.|.|.:|  |..|.|.|..:..|    .||  .:.|..|.|
Zfish   215 KGVNKEITVNIDDDCPRCDGKAFEPGTKVSH--CHYCNGTGMESINT----GPFMMRSACRRCSG 273

  Fly   180 RGFTIRDDKKCSPCQGSGFVEQKMKRDLVVERGAP--HMLKVPFANEGHQMRGGEFGDLIVVISQ 242
            |||.|  ...|..|:|||..:||....:.|..|..  ..:|||...:          .:.:....
Zfish   274 RGFII--ITPCIMCRGSGQTKQKQTVMVPVPAGIADGQTVKVPVGKK----------HMYITFRV 326

  Fly   243 MEHPIFQRRHANLYMRDLEINITEALCG--------YSHCFKHLDGRNVCLRTYPGEVLQHNQIK 299
            .:.|:|:|..|::: .|:.|:|.:|:.|        ||         .:.:...||....| :||
Zfish   327 QKSPVFRRDGADIH-SDVLISIAQAILGGTARAQGLYS---------TIDIAIPPGIQTDH-KIK 380

  Fly   300 MVRGSGMPVFNKATDSGDLYMKFKVKFPDNDFATAPQLAMLEDLLPPRQPIVIPKNAEEVQMTD- 363
            : .|.|:|..| :...||.|:..|:|.|..              |..||.:::...||:.:..: 
Zfish   381 L-EGKGIPRMN-SFGYGDHYVYIKIKIPKK--------------LTRRQKMLLLSFAEDEEDVEG 429

  Fly   364 -----YKPQPRQ----QEDEDGQSSHFE 382
                 .||.|.:    |....|||...|
Zfish   430 TVNGVTKPAPGRSQAGQTSTSGQSREEE 457

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
DnaJ-HNP_001260431.1 DnaJ 1..363 CDD:223560 111/387 (29%)
DnaJ 5..64 CDD:278647 30/61 (49%)
DnaJ_C 106..329 CDD:199909 63/240 (26%)
DnaJ_zf 134..197 CDD:199908 23/67 (34%)
dnaja3bNP_958499.1 DnaJ 85..428 CDD:223560 111/387 (29%)
DnaJ 86..148 CDD:278647 30/61 (49%)
DnaJ_C 203..409 CDD:199909 63/250 (25%)
DnaJ_zf 229..289 CDD:199908 23/67 (34%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.910

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