DRSC/TRiP Functional Genomics Resources

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Protein Alignment kmg and CG30020

DIOPT Version :9

Sequence 1:NP_609604.1 Gene:kmg / 34706 FlyBaseID:FBgn0032473 Length:747 Species:Drosophila melanogaster
Sequence 2:NP_610627.2 Gene:CG30020 / 36156 FlyBaseID:FBgn0050020 Length:1309 Species:Drosophila melanogaster


Alignment Length:1050 Identity:188/1050 - (17%)
Similarity:305/1050 - (29%) Gaps:435/1050 - (41%)


- Green bases have known domain annotations that are detailed below.


  Fly    75 VSADSAP--PGDLAKE----------NMENSL-----------PDGNPCNNN---NDDELPQC-- 111
            ||||:||  |..:..|          .::|:|           |..:...|.   .:.|.|.|  
  Fly    66 VSADNAPELPQHICLECSKSLQVAYYFLQNALRAHEILCRKLCPKVSKRLNGTLAQEQEKPACAE 130

  Fly   112 -----KIRRNYSCNQCAFFTQNPRSHLSHLRDVHGERIVINECKLCLYASRHFQKLVRHMKMVHG 171
                 |..| :.|..|.....|......|:|. |.|.:..| ||||.:.|...:.|..|...:|.
  Fly   131 PVQPLKTMR-HECQVCGVVLYNRLELKQHIRQ-HAEGLSYN-CKLCSFTSLKQRTLFEHYVTMHN 192

  Fly   172 CSDDGGAVQGSGAQPRGKRNLSREVRKRRLEESIEGQGATGQCLDLSVLRMIQNGPPLEQLKVEL 236
            ..                  ||      :.||.::.:...              .|..|::|...
  Fly   193 MP------------------LS------QAEEYVKSKHLP--------------APKEEEVKAVC 219

  Fly   237 QQQEMQLLASVQAYNRQQEMLQLQQIVES-------HDNIFSM-----AYEFQTKLMPPKQAESL 289
            ..::|:||  :....|.::.:|....:::       |....||     :.:..|..:||....::
  Fly   220 TLEDMELL--IPTVLRPEDYVQPHPHIDNDQLRDIDHQLAVSMDEPVPSVDSLTSTLPPMDTPNV 282

  Fly   290 ------------KLEQQNSS-------SDSEETAKS---------------PSP-DTRELV---- 315
                        .|:|.|.|       .||:..:.|               |.. |..||:    
  Fly   283 SIGTEYLVLPDGSLQQVNGSGVVIEYIDDSKPNSSSNVNVSLQNLLSSHNDPMDIDVNELIVEEM 347

  Fly   316 --------------SGKEQFQCQKCSYSTPIRARFKKHVKYHS-MPLIKCSSCDFHTPYKWNLDR 365
                          :...:.:|:.|..:....||.|.|...|| :|...|..|||::....:|.:
  Fly   348 MPQIRIKPKPAVIGTSIHKHKCKFCPKTFSTVARLKSHQLTHSNLPKFFCDQCDFYSLRSADLIQ 412

  Fly   366 HTK-------NHGANGH----------FKCSCCDFSTDIKQSLTIHESNHH-------------- 399
            |.|       .:|..|.          :.|..|.|.|.....|..|....|              
  Fly   413 HYKMVHHRVDENGKTGKEQAQGIESRVYSCDMCLFETSTVSQLRTHYKERHTVQPTEVQLRPSWT 477

  Fly   400 ---------------------------------------VPMP---VHQMGNRSRDEAEDLVDQQ 422
                                                   .|:|   |||       ...|.:.|.
  Fly   478 GEPTTTRGVAAKQQTPAKILNHTDIPLGIKYPPGVLETQAPLPQPVVHQ-------PMPDPMQQT 535

  Fly   423 SSGSRKPETFKNGG-------AT----VASTESLL----------PRTSGIVCSHC--------- 457
            ...:....|....|       ||    .|::.|||          ..|:|...:|.         
  Fly   536 EPMATTSTTITESGDINVVVDATPLFYAATSNSLLVTNPAPVTTVEETTGTASNHAFGIFPEISE 600

  Fly   458 ---------QKRVGN--AMQLINHLQ----------VCTLALHNTTQLQA--------SINAEVD 493
                     |:...|  ::.:...:|          :||:.......:..        :|:.:.|
  Fly   601 GNLPVNEAVQQAPANSSSVSVFGDMQDFIDNTDVAAICTIPADGMPVVDGDDIVIDNNNISLDFD 665

  Fly   494 LHD--EDFPNAPTDLSYCGVETAPGYGE------VTE---VLPEEPEDL--------APLKKVFK 539
            ..:  |||.....|......:.|....|      .|:   :|..:.:|:        ..|:|.: 
  Fly   666 AENLFEDFEEEEDDTVADEEDEADNEDENDNNDAATDQNLLLTSDDDDVDDFDDEQSKHLQKPY- 729

  Fly   540 CPHCSFWAATASRFHVHIVGHLNRKPFECSLCAYRSNWRWDITKHIRL--KALRDRSHNQAQVLM 602
            |.:|:....:..:|..|:..|....|:.|.||....|.:..:.||.:.  |.:..|...||:   
  Fly   730 CIYCNKKFTSQYKFENHMFVHRGLAPYRCELCTNLYNMKRLLIKHYKTVHKRMPTRDMVQAK--- 791

  Fly   603 NDE--TGRRNYAKY------NQYLTMMKVSAEQLADSK---------GMRTG------EMIV--- 641
            .|:  ..|.|..|.      |..|...|...|..:||:         |:..|      |:.:   
  Fly   792 GDKVSVARTNIEKLYPGRIKNPMLMCAKCPFECESDSEMRKHLNAHHGINDGVSEHANEVFIIRK 856

  Fly   642 MPPE----------------KLDDHHPMETEEIIEM--------VDSAHSTSALDLRKPRDDQTE 682
            :|.|                .|...|.::|  ||||        :.:..:||:..:.:|.:..|.
  Fly   857 LPFECPRCIRSFAAKTTLSRHLQRSHLVDT--IIEMQTPHCGEAITTTMATSSSTISEPVNSVTV 919

  Fly   683 D------------------LAGNSD-----------------ELPQE------------------ 694
            |                  ..||.|                 .:|:|                  
  Fly   920 DGQHNEMMQTDVGAEKMTEALGNGDGNEEGGTDDGTGVKAEPAVPEEELDPVTLDAATAVTTTAI 984

  Fly   695 -------GAKTEPNLE-PLSFKSLNSSQVMPKP---------------KGSPMNLTKTDGGQSDE 736
                   .|.|..:|| |::..:.:|:.:.|.|               :.|| |:.......||.
  Fly   985 AAAISAAAAATATSLESPVATTASSSTTLFPTPTPFDFDYDIMRDEAQQSSP-NIHDVSKALSDN 1048

  Fly   737 TTSADESNES 746
            .:|:...|||
  Fly  1049 ASSSCPINES 1058

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
kmgNP_609604.1 C2H2 Zn finger 540..560 CDD:275370 4/19 (21%)
C2H2 Zn finger 568..586 CDD:275370 6/17 (35%)
CG30020NP_610627.2 zf-AD 25..106 CDD:285071 10/39 (26%)
C2H2 Zn finger 369..389 CDD:275368 6/19 (32%)
C2H2 Zn finger 397..418 CDD:275368 7/20 (35%)
C2H2 Zn finger 442..460 CDD:275368 6/17 (35%)
C2H2 Zn finger 730..750 CDD:275368 4/19 (21%)
C2H2 Zn finger 758..777 CDD:275368 6/18 (33%)
C2H2 Zn finger 1089..1110 CDD:275368
C2H2 Zn finger 1124..1144 CDD:275368
C2H2 Zn finger 1151..1172 CDD:275368
C2H2 Zn finger 1180..1203 CDD:275368
C2H2 Zn finger 1210..1230 CDD:275368
C2H2 Zn finger 1238..1254 CDD:275368
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR24403
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
11.100

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