DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment kmg and Zfp407

DIOPT Version :9

Sequence 1:NP_609604.1 Gene:kmg / 34706 FlyBaseID:FBgn0032473 Length:747 Species:Drosophila melanogaster
Sequence 2:XP_008770443.2 Gene:Zfp407 / 307213 RGDID:1310645 Length:2255 Species:Rattus norvegicus


Alignment Length:925 Identity:186/925 - (20%)
Similarity:287/925 - (31%) Gaps:334/925 - (36%)


- Green bases have known domain annotations that are detailed below.


  Fly    13 RLVVRSLVSGAPLYQSSIEGGAGAVL---PMSQSVQPLIGQDFLEQQLEQYKANNFMFPLSMAGF 74
            ||.|:.|       ::.::..|..||   .|.:.||.|........::.|.|..:     .::||
  Rat   450 RLYVKHL-------RTQMKANAQPVLEQMQMGKDVQSLCVTTSDNPEVMQDKTAS-----GLSGF 502

  Fly    75 VSADSAPPGDLAKENMENSLPDGNPCNN------NNDD---ELPQCKIRR-NYSCNQCAFFTQNP 129
            ...     |.|..:..::.|....||..      |..|   .:.:|.:|. .:.|..|.|.:.:.
  Rat   503 TRL-----GSLEVKPADHQLSVQCPCTECGQITANKTDLDIHVQKCHVREVQFHCQTCDFSSPSR 562

  Fly   130 RSHLSHLR-DVHGERIVINECKLCLYASRHFQKLVRHMKMVHG----CSDDGGAVQGSGAQPRGK 189
            |....||. :.|.:...:..|:.|.:.|.....|..|||..||    |:               .
  Rat   563 RDLEEHLHSNQHQQTTPVLSCQCCPFISLSETSLRVHMKEKHGMGFFCT---------------S 612

  Fly   190 RNLSREVRKRRLEESIEGQGATGQCLDLSVLRMIQNGPPLEQLKVELQQQEMQLLASVQAYNRQQ 254
            .||...      |..:|...||                                           
  Rat   613 CNLFLS------ERDVEEHRAT------------------------------------------- 628

  Fly   255 EMLQLQQIVESHDNIFSMAYEFQTKLMPPKQAESLK---------LEQQNSSSDSEETAKS---- 306
                     |:|:::          ::.||.|.||.         ||..|.:...|::.|:    
  Rat   629 ---------EAHNSL----------VVQPKTASSLSRDSVLPLSTLESDNMADSREDSGKASQEE 674

  Fly   307 -----PSPDTRELVSGKEQFQCQKCSYSTPIRARFKKHVK------YHSMPLIKCSSCDFHTPYK 360
                 .|..|....|.|.||||:||.|.|.......:|:|      ||.:    |.:|:.::..|
  Rat   675 PAESRASHGTEARHSSKPQFQCKKCFYKTRSSTVLTRHIKLRHGQDYHFL----CKACNLYSLSK 735

  Fly   361 WNLDRH----------TKNHGANGHFKC--SCCDFSTDIKQSLTIHESNH---HV---------- 400
            ..:::|          .||:......:|  ..|..:.|.|:...:..|..   |:          
  Rat   736 EGMEKHIKRSKHLENAKKNNIGLSFEECIERVCIGANDKKEESNVSGSGRPEGHIGVRLQEHSHC 800

  Fly   401 ------PMPVHQMGNRSRDEAEDLVDQQSSGSRK---PETFKNGGATVASTESLLPR-------- 448
                  |..:.|.|..::::...|......|..|   ..|..:.|...:|..:|...        
  Rat   801 EQSMLTPKELPQSGVITKEDELGLASTPKRGRPKGSISRTCSHCGLLASSITNLTVHIRRKHSHQ 865

  Fly   449 -------------TSGIVCSHC--QKRVG---------NAMQLI-----NHLQVC---TLALHNT 481
                         |.|.:..||  :|..|         ::..:|     .:|:.|   |||| ..
  Rat   866 YSYLCKVCKYYTVTKGDMERHCATKKHKGRVEIEANGKHSSDIIVGPEGGNLEACKKSTLAL-TV 929

  Fly   482 TQLQASINAEVDLHDEDFP---NAPTDLSYCGVETAPGYGEVTEVLPE-------EPEDLAPLKK 536
            :..||:.:|:.|....|.|   |..|..:..|.......|||:..|.:       |.|||.....
  Rat   930 SDEQANKSAKSDASTLDKPVVGNGDTGDADAGSALQSVDGEVSSQLADKKGQIALETEDLQQHDD 994

  Fly   537 VF-----------KCPHCSFWAATASRFHVHIV-GHLNRKPFECSLCAYRSNWRWDITKHIRLKA 589
            ..           ||.||.|.|.:|:...:|:. .|.....|.|..|.|.:..|.::|:|...: 
  Rat   995 ACSQRDVAGSSDNKCLHCEFSAHSAASLELHVKRKHTKEFEFYCMACDYYAVTRREMTRHAATE- 1058

  Fly   590 LRDRSHNQAQVLMNDETGRRNYAKYNQYLTMMKVSAEQLADSKGMRTGEMIVMPPEKLDDHHPME 654
                               ::..|...||:...|.|.....||.      |.:|.|:    |...
  Rat  1059 -------------------KHKMKRQSYLSSSNVEAGSSEISKS------ITIPEEE----HSQN 1094

  Fly   655 TEEIIEMVDSAHSTSALDLRKPRD----------DQTEDLAG--------------NSDE----- 690
            :||.  .:....|:..|..|.|.|          |.::.|..              |.|.     
  Rat  1095 SEEF--QISPHQSSGTLQSRHPADCSILYDNTNLDMSKVLCAPDSVAVVAEQESNFNEDHSFCET 1157

  Fly   691 LPQEGAKTEPNLEPLSFKSLNSSQVMPKPKGSP---------------------MNLTKTDGGQS 734
            |.|..|| :.:::|....|||:    |..:.||                     .||....|..|
  Rat  1158 LHQPLAK-DRSIKPREIVSLNT----PSNRSSPGCLQSGNLASSAVDSETAKRNHNLLDDVGDTS 1217

  Fly   735 ----DETTSADESNE 745
                ||..|.|.|.|
  Rat  1218 AHCEDEGGSLDGSEE 1232

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
kmgNP_609604.1 C2H2 Zn finger 540..560 CDD:275370 7/20 (35%)
C2H2 Zn finger 568..586 CDD:275370 6/17 (35%)
Zfp407XP_008770443.2 None


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR24403
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.100

Return to query results.
Submit another query.