DRSC/TRiP Functional Genomics Resources

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Protein Alignment kmg and Zfp407

DIOPT Version :10

Sequence 1:NP_609604.1 Gene:kmg / 34706 FlyBaseID:FBgn0032473 Length:747 Species:Drosophila melanogaster
Sequence 2:XP_008770443.2 Gene:Zfp407 / 307213 RGDID:1310645 Length:2255 Species:Rattus norvegicus


Alignment Length:925 Identity:186/925 - (20%)
Similarity:287/925 - (31%) Gaps:334/925 - (36%)


- Green bases have known domain annotations that are detailed below.


  Fly    13 RLVVRSLVSGAPLYQSSIEGGAGAVL---PMSQSVQPLIGQDFLEQQLEQYKANNFMFPLSMAGF 74
            ||.|:.|       ::.::..|..||   .|.:.||.|........::.|.|..:     .::||
  Rat   450 RLYVKHL-------RTQMKANAQPVLEQMQMGKDVQSLCVTTSDNPEVMQDKTAS-----GLSGF 502

  Fly    75 VSADSAPPGDLAKENMENSLPDGNPCNN------NNDD---ELPQCKIRR-NYSCNQCAFFTQNP 129
            ...     |.|..:..::.|....||..      |..|   .:.:|.:|. .:.|..|.|.:.:.
  Rat   503 TRL-----GSLEVKPADHQLSVQCPCTECGQITANKTDLDIHVQKCHVREVQFHCQTCDFSSPSR 562

  Fly   130 RSHLSHLR-DVHGERIVINECKLCLYASRHFQKLVRHMKMVHG----CSDDGGAVQGSGAQPRGK 189
            |....||. :.|.:...:..|:.|.:.|.....|..|||..||    |:               .
  Rat   563 RDLEEHLHSNQHQQTTPVLSCQCCPFISLSETSLRVHMKEKHGMGFFCT---------------S 612

  Fly   190 RNLSREVRKRRLEESIEGQGATGQCLDLSVLRMIQNGPPLEQLKVELQQQEMQLLASVQAYNRQQ 254
            .||...      |..:|...||                                           
  Rat   613 CNLFLS------ERDVEEHRAT------------------------------------------- 628

  Fly   255 EMLQLQQIVESHDNIFSMAYEFQTKLMPPKQAESLK---------LEQQNSSSDSEETAKS---- 306
                     |:|:::          ::.||.|.||.         ||..|.:...|::.|:    
  Rat   629 ---------EAHNSL----------VVQPKTASSLSRDSVLPLSTLESDNMADSREDSGKASQEE 674

  Fly   307 -----PSPDTRELVSGKEQFQCQKCSYSTPIRARFKKHVK------YHSMPLIKCSSCDFHTPYK 360
                 .|..|....|.|.||||:||.|.|.......:|:|      ||.:    |.:|:.::..|
  Rat   675 PAESRASHGTEARHSSKPQFQCKKCFYKTRSSTVLTRHIKLRHGQDYHFL----CKACNLYSLSK 735

  Fly   361 WNLDRH----------TKNHGANGHFKC--SCCDFSTDIKQSLTIHESNH---HV---------- 400
            ..:::|          .||:......:|  ..|..:.|.|:...:..|..   |:          
  Rat   736 EGMEKHIKRSKHLENAKKNNIGLSFEECIERVCIGANDKKEESNVSGSGRPEGHIGVRLQEHSHC 800

  Fly   401 ------PMPVHQMGNRSRDEAEDLVDQQSSGSRK---PETFKNGGATVASTESLLPR-------- 448
                  |..:.|.|..::::...|......|..|   ..|..:.|...:|..:|...        
  Rat   801 EQSMLTPKELPQSGVITKEDELGLASTPKRGRPKGSISRTCSHCGLLASSITNLTVHIRRKHSHQ 865

  Fly   449 -------------TSGIVCSHC--QKRVG---------NAMQLI-----NHLQVC---TLALHNT 481
                         |.|.:..||  :|..|         ::..:|     .:|:.|   |||| ..
  Rat   866 YSYLCKVCKYYTVTKGDMERHCATKKHKGRVEIEANGKHSSDIIVGPEGGNLEACKKSTLAL-TV 929

  Fly   482 TQLQASINAEVDLHDEDFP---NAPTDLSYCGVETAPGYGEVTEVLPE-------EPEDLAPLKK 536
            :..||:.:|:.|....|.|   |..|..:..|.......|||:..|.:       |.|||.....
  Rat   930 SDEQANKSAKSDASTLDKPVVGNGDTGDADAGSALQSVDGEVSSQLADKKGQIALETEDLQQHDD 994

  Fly   537 VF-----------KCPHCSFWAATASRFHVHIV-GHLNRKPFECSLCAYRSNWRWDITKHIRLKA 589
            ..           ||.||.|.|.:|:...:|:. .|.....|.|..|.|.:..|.::|:|...: 
  Rat   995 ACSQRDVAGSSDNKCLHCEFSAHSAASLELHVKRKHTKEFEFYCMACDYYAVTRREMTRHAATE- 1058

  Fly   590 LRDRSHNQAQVLMNDETGRRNYAKYNQYLTMMKVSAEQLADSKGMRTGEMIVMPPEKLDDHHPME 654
                               ::..|...||:...|.|.....||.      |.:|.|:    |...
  Rat  1059 -------------------KHKMKRQSYLSSSNVEAGSSEISKS------ITIPEEE----HSQN 1094

  Fly   655 TEEIIEMVDSAHSTSALDLRKPRD----------DQTEDLAG--------------NSDE----- 690
            :||.  .:....|:..|..|.|.|          |.::.|..              |.|.     
  Rat  1095 SEEF--QISPHQSSGTLQSRHPADCSILYDNTNLDMSKVLCAPDSVAVVAEQESNFNEDHSFCET 1157

  Fly   691 LPQEGAKTEPNLEPLSFKSLNSSQVMPKPKGSP---------------------MNLTKTDGGQS 734
            |.|..|| :.:::|....|||:    |..:.||                     .||....|..|
  Rat  1158 LHQPLAK-DRSIKPREIVSLNT----PSNRSSPGCLQSGNLASSAVDSETAKRNHNLLDDVGDTS 1217

  Fly   735 ----DETTSADESNE 745
                ||..|.|.|.|
  Rat  1218 AHCEDEGGSLDGSEE 1232

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
kmgNP_609604.1 C2H2 Zn finger 540..560 CDD:275370 7/20 (35%)
C2H2 Zn finger 568..586 CDD:275370 6/17 (35%)
Zfp407XP_008770443.2 C2H2 Zn finger 523..544 CDD:275368 3/20 (15%)
C2H2 Zn finger 552..574 CDD:275368 6/21 (29%)
C2H2 Zn finger 583..601 CDD:275368 5/17 (29%)
C2H2 Zn finger 1405..1434 CDD:275371
C2H2 Zn finger 1435..1457 CDD:275371
C2H2 Zn finger 1477..1498 CDD:275371
C2H2 Zn finger 1528..1550 CDD:275368
zf-H2C2_2 1546..1567 CDD:463886
C2H2 Zn finger 1558..1578 CDD:275368
C2H2 Zn finger 1586..1606 CDD:275368
C2H2 Zn finger 1619..1639 CDD:275368
zf-H2C2_2 1631..1658 CDD:463886
C2H2 Zn finger 1647..1669 CDD:275368
C2H2 Zn finger 1677..1697 CDD:275368
zf-H2C2_2 1689..1714 CDD:463886
zf-H2C2_5 1703..1727 CDD:404746
C2H2 Zn finger 1705..1725 CDD:275368
zf-H2C2_2 1717..1742 CDD:463886
C2H2 Zn finger 1733..1750 CDD:275368
Blue background indicates that the domain is not in the aligned region.

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