DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment kmg and Zfp93

DIOPT Version :10

Sequence 1:NP_609604.1 Gene:kmg / 34706 FlyBaseID:FBgn0032473 Length:747 Species:Drosophila melanogaster
Sequence 2:NP_001100016.1 Gene:Zfp93 / 296399 RGDID:1309760 Length:427 Species:Rattus norvegicus


Alignment Length:408 Identity:80/408 - (19%)
Similarity:121/408 - (29%) Gaps:150/408 - (36%)


- Green bases have known domain annotations that are detailed below.


  Fly   322 QCQKCSYSTPIRARFKKHVKYHS--MPLIKCSSCDFHTPYKWNLDRHTKNHGANGHFKCSCCD-- 382
            :|..|.|:....:..|||::.||  .| .||..|.:.:.....|..|.::|..:..|:|..|.  
  Rat   141 KCHLCDYAAVDSSSLKKHLRIHSDERP-YKCQMCPYASRNSSQLTVHLRSHTGDTPFQCWLCSAK 204

  Fly   383 --FSTDIKQSLTIHESNHHVPMPVHQMGNRSRDEAEDLVDQQSSGSRKPETFKNGGATVASTESL 445
              .|:|:|:.:.:|....  |........|...:|     ...|..|...|||            
  Rat   205 FKISSDLKRHMIVHSGEK--PFKCEFCDVRCTMKA-----NLKSHIRIKHTFK------------ 250

  Fly   446 LPRTSGIVCSHCQKRVGNAMQLINHLQVCTLALHNTTQLQASINAEVDLHDEDFPNAPTDLSYCG 510
                    |.||..:..:...|:.|.:                     ||..|.|.         
  Rat   251 --------CLHCAFQGRDRADLLEHSR---------------------LHQADHPE--------- 277

  Fly   511 VETAPGYGEVTEVLPEEPEDLAPLKKVFKCPHCSFWAATASRFHVHIVGHLNRKPFECSLCAYRS 575
                                        |||.||:..::.:...||...|...:||:|..|::.:
  Rat   278 ----------------------------KCPECSYSCSSPAALRVHSRVHCKDRPFKCDFCSFDT 314

  Fly   576 NWRWDITKHIRLKALRDRSHNQAQVLMNDETGRRNYAKYNQYLTMMKVSAEQLADSKGMRTGEMI 640
            .....:.|||      |:.|.:.....|                    .|.|..|.         
  Rat   315 KRPSSLAKHI------DKVHRERAKTEN--------------------RAPQGKDG--------- 344

  Fly   641 VMPPEKLDDHH--PMETEEIIEMVDSAHSTSALD--LR---KPRDDQTEDLAGNSDELPQEG--- 695
               |.:...||  .:.|::... .|...::.|.|  ||   |...|..|:...|....|.||   
  Rat   345 ---PRESGPHHVTNIVTQKAFR-CDKCGASFARDDSLRCHQKQHSDWGENKNSNLVSFPLEGIAS 405

  Fly   696 ---------AKTEPNLEP 704
                     .:.|..|||
  Rat   406 GQLGPLVSVEQLESTLEP 423

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
kmgNP_609604.1 C2H2 Zn finger 540..560 CDD:275370 6/19 (32%)
C2H2 Zn finger 568..586 CDD:275370 4/17 (24%)
Zfp93NP_001100016.1 COG5048 <96..227 CDD:227381 23/88 (26%)
zf-H2C2_2 98..123 CDD:463886
C2H2 Zn finger 114..134 CDD:275368
C2H2 Zn finger 142..162 CDD:275368 6/19 (32%)
C2H2 Zn finger 170..190 CDD:275368 4/19 (21%)
C2H2 Zn finger 198..218 CDD:275368 5/19 (26%)
C2H2 Zn finger 226..245 CDD:275368 3/23 (13%)
C2H2 Zn finger 279..299 CDD:275368 6/19 (32%)
C2H2 Zn finger 307..328 CDD:275368 6/26 (23%)
C2H2 Zn finger 364..384 CDD:275368 6/19 (32%)
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.