DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment kmg and zfp64

DIOPT Version :9

Sequence 1:NP_609604.1 Gene:kmg / 34706 FlyBaseID:FBgn0032473 Length:747 Species:Drosophila melanogaster
Sequence 2:NP_001373446.1 Gene:zfp64 / 100003733 ZFINID:ZDB-GENE-031118-80 Length:642 Species:Danio rerio


Alignment Length:380 Identity:74/380 - (19%)
Similarity:114/380 - (30%) Gaps:124/380 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly   117 YSCNQCAFFTQNPRSHLSHLRDVHGERIVINECKLCLYASRHFQKLVRHMKMVHGCSDDGGAVQG 181
            :.|..|.:...:..|...|||..:.||..  :|::|.||||:..:|..|::...|          
Zfish   152 HKCKYCTYAAADSSSLKKHLRIHYDERPF--KCQICPYASRNSSQLTVHLRSHTG---------- 204

  Fly   182 SGAQPRGKRNLSREVRKRRLEESIEGQGATGQCLDLSVLRMIQNGPPLEQLKVELQQQEMQLLAS 246
                                       .|..||                                
Zfish   205 ---------------------------DAPFQC-------------------------------- 210

  Fly   247 VQAYNRQQEMLQLQQIVESHDNIFSMAYEFQTKLMPPKQAESLKLEQ----QNSSSDSEETAKSP 307
                |:.....::...::.|..:.|....::..|...:.|....|:.    ::|:|||       
Zfish   211 ----NQCDAKFKINSDLKRHSRVHSGEKPYKCDLCDYRCAMKANLKSHVHLKHSASDS------- 264

  Fly   308 SPDTRELVSGKEQFQCQKCSYSTPIRARFKKHVKYH--SMPLIKCSSCDFHTPYKWNLDRHTKNH 370
                         |.|.||.:....:|..:.|.:.|  :.|| :||.|.:....|..|..|.:.|
Zfish   265 -------------FHCSKCDFQCSTKAALRHHSRQHQPAQPL-QCSECSYSCSSKGALKIHERVH 315

  Fly   371 GANGHFKCSCCDFSTDIKQSLTIHESNHHVPMPVH-QMGNRSRDEAEDLVDQQSSGSRKPETFKN 434
            .....|||..|.|::..:.:|.||....|...|.. ....|.....|||....||..|       
Zfish   316 SDERPFKCDLCSFASKQRSNLLIHTRKCHADKPDRLSKSGRISGNGEDLTKPISSRYR------- 373

  Fly   435 GGATVASTESLLPRTSGIVCSHCQKRVGNAMQLINHLQVCTLALHNTTQLQASIN 489
                     :.|..|....|..|:........|.:|.:     .||....|.|.|
Zfish   374 ---------AKLEATRAYRCDLCEASFVREDSLRSHKR-----QHNNITQQQSHN 414

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
kmgNP_609604.1 C2H2 Zn finger 540..560 CDD:275370
C2H2 Zn finger 568..586 CDD:275370
zfp64NP_001373446.1 C2H2 Zn finger 95..118 CDD:275368
zf-H2C2_2 110..135 CDD:404364
C2H2 Zn finger 126..146 CDD:275368
zf-H2C2_2 139..162 CDD:404364 2/9 (22%)
C2H2 Zn finger 154..174 CDD:275368 6/19 (32%)
SFP1 <176..260 CDD:227516 20/158 (13%)
C2H2 Zn finger 182..202 CDD:275368 8/19 (42%)
C2H2 Zn finger 210..230 CDD:275368 3/55 (5%)
zf-H2C2_2 222..246 CDD:404364 3/23 (13%)
C2H2 Zn finger 238..257 CDD:275368 3/18 (17%)
C2H2 Zn finger 323..341 CDD:275368 6/17 (35%)
C2H2 Zn finger 384..404 CDD:275368 4/24 (17%)
SP1-4_N <408..>605 CDD:425404 3/7 (43%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170577401
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR24403
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
22.030

Return to query results.
Submit another query.