DRSC/TRiP Functional Genomics Resources

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Protein Alignment Pk34A and Cdk8

DIOPT Version :10

Sequence 1:NP_609603.1 Gene:Pk34A / 34705 FlyBaseID:FBgn0028410 Length:392 Species:Drosophila melanogaster
Sequence 2:NP_536735.2 Gene:Cdk8 / 39157 FlyBaseID:FBgn0015618 Length:454 Species:Drosophila melanogaster


Alignment Length:273 Identity:82/273 - (30%)
Similarity:134/273 - (49%) Gaps:51/273 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly    43 RIEVKDL-------IGSGSFGRVYQAHVNESEE--IVAVKQTLYNPKLSQG---EAEIMGQLKDH 95
            |.:|:||       :|.|::|.||:|...|:.:  ..|:|| :....||..   |..::.:|| |
  Fly    13 RTKVEDLFNYEGCKVGRGTYGHVYKAKWKETSDGKEYALKQ-IDGTGLSMSACREIALLRELK-H 75

  Fly    96 NNIVRLI----MHSSVSLGFPSVDYVLLVMEYMPMTLLDYINYHLTVLQPAERLI----NVRILS 152
            .|::.||    .|:...        |.|:::|....|...|.:|.......::::    .|:.|.
  Fly    76 QNVITLIRVFLSHNDRK--------VFLLIDYAEHDLWHIIKFHRAAKATKKQVVVPRGMVKSLL 132

  Fly   153 YQMFRGLGYLHLLGISHRDVKPENLLI---DNQKMVLKLSDFGSAKLL-VPQEPSIS---YICSR 210
            ||:..|:.|||...:.|||:||.|:|:   .|::..:|::|.|.|:|. .|.:|...   .:.:.
  Fly   133 YQILDGIHYLHSNWVLHRDLKPANILVMGDGNERGRVKIADMGFARLFNAPLKPLADLDPVVVTF 197

  Fly   211 LYRAPELFAGYELYSCAVDIWSAGCVLAELLKGYPLFSSHKHDRK--------QLRLIVNMLG-- 265
            .||||||..|...|:.|:|||:.||:.||||...|:|...:.|.|        ||..|.|::|  
  Fly   198 WYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQEDIKTSNPYHHDQLDRIFNVMGFP 262

  Fly   266 ----TDGLERAPE 274
                .:.:::.||
  Fly   263 QDKDWEDIKKMPE 275

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Pk34ANP_609603.1 STKc_GSK3 39..334 CDD:271039 82/273 (30%)
Cdk8NP_536735.2 STKc_CDK8_like 19..335 CDD:270834 79/267 (30%)

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