DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Pk34A and gsk3ba

DIOPT Version :9

Sequence 1:NP_609603.1 Gene:Pk34A / 34705 FlyBaseID:FBgn0028410 Length:392 Species:Drosophila melanogaster
Sequence 2:XP_009302769.1 Gene:gsk3ba / 30654 ZFINID:ZDB-GENE-990714-4 Length:425 Species:Danio rerio


Alignment Length:358 Identity:140/358 - (39%)
Similarity:201/358 - (56%) Gaps:18/358 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly    25 SVISTYAVGRLCSEPALVRIEVKDLIGSGSFGRVYQAHVNESEEIVAVKQTLYNPKLSQGEAEIM 89
            :|::|...|.  ..|..|......:||:||||.||||.:.:|.|:||:|:.|.:.:....|.:||
Zfish    39 TVVATPGQGP--DRPQEVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRELQIM 101

  Fly    90 GQLKDHNNIVRL--IMHSSVSLGFPSVD-YVLLVMEYMPMTLLDYINYHLTVLQPAERLINVRIL 151
            .:| ||.|||||  ..:||   |....: |:.||::|:|.|:.....::....|... ::.|::.
Zfish   102 RKL-DHCNIVRLRYFFYSS---GDKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLP-MVYVKLY 161

  Fly   152 SYQMFRGLGYLHLLGISHRDVKPENLLIDNQKMVLKLSDFGSAKLLVPQEPSISYICSRLYRAPE 216
            .||:||.|.|:|..||.|||:||:|||:|....||||.||||||.||..||::||||||.|||||
Zfish   162 MYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRYYRAPE 226

  Fly   217 LFAGYELYSCAVDIWSAGCVLAELLKGYPLFSSHKHDRKQLRLIVNMLGTDGLERAPEILSKCGN 281
            |..|...|:.::|:|||||||||||.|.|:|.... ...||..|:.:|||...|:..|:......
Zfish   227 LIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDS-GVDQLVEIIKVLGTPTREQIREMNPNYTE 290

  Fly   282 SLHPRTTRPSW----NYLLNTAVPQDLCGLLNSCFIYEAAARISPMMACSHGSYDELRIMDAMAL 342
            ...|:.....|    ..:.....|.:...|.:....|...||::|:.||:|..:||||..:   :
Zfish   291 FKFPQIKAHPWTKVSKQVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHSFFDELREPN---V 352

  Fly   343 PMPNGNPLPPLFDFNSLEMGTDPKLWVNLLPIH 375
            .:|||...|.||:|.:.|:.::|.|...|:|.|
Zfish   353 KLPNGREKPSLFNFTTQELSSNPTLASILIPAH 385

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Pk34ANP_609603.1 STKc_GSK3 39..334 CDD:271039 121/301 (40%)
S_TKc 45..328 CDD:214567 117/289 (40%)
gsk3baXP_009302769.1 STKc_GSK3 51..347 CDD:271039 121/301 (40%)
Pkinase 56..344 CDD:278497 118/293 (40%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG0658
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D990896at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
ZFIN 00.000 Not matched by this tool.
43.780

Return to query results.
Submit another query.