DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG5122 and Cpt1c

DIOPT Version :9

Sequence 1:NP_609601.1 Gene:CG5122 / 34703 FlyBaseID:FBgn0032471 Length:1263 Species:Drosophila melanogaster
Sequence 2:NP_001344599.1 Gene:Cpt1c / 78070 MGIID:2446526 Length:799 Species:Mus musculus


Alignment Length:649 Identity:196/649 - (30%)
Similarity:305/649 - (46%) Gaps:97/649 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly   661 KKPELKKFP-ALP------LKQSIASYLSSIEPFLNEEELKVEQKVAKKFVDNEGAKLQQLLEEE 718
            :.|.|..|. |||      .::::..||.|:.|.|.::.......:|..|:.....:||..|:.:
Mouse   160 RHPRLFSFQRALPRQPVPSAQETVRKYLESVRPVLGDDAFDRATALANDFLRLHAPRLQLYLQLK 224

  Fly   719 AEGTDNWLTPRWTRSAYLTYQAPLT----------VFSSPGLSFPIQEFKDTNDFLNFTAKAIYG 773
            :..|.|:::..|....||..:..|.          ::.:|   .|:|..:..|        |::.
Mouse   225 SWCTSNYVSDWWEEFVYLRSRGSLINSTYYMMQDFLYVTP---TPLQAARAGN--------AVHT 278

  Fly   774 MCEFKQLVDQNKI-PVVQMGKHQLDNSQFGKIFGTVRKPGRFCDTIEQYNDADYIVVVYNNNYFK 837
            :..::.|:::.:| |.:.||...|.::|:.::|.|.|.||...|.:....|:.::.|.:...:|:
Mouse   279 LLLYRHLLNRQEISPTLLMGMRPLCSAQYERMFNTTRIPGVEKDHLRHLQDSRHVAVFHRGRFFR 343

  Fly   838 LPIYSQSGALLHAHTLRDALQDILE-----CPIKVGKHFGLLTHDNRSNWAEAYTVLCRPHGNAD 897
            :..:|.:| ||....|....||||:     ||::  :|...||...||.||:....: :.|. |.
Mouse   344 VGTHSPNG-LLSPRALEQQFQDILDDPSPACPLE--EHLAALTAAPRSMWAQVRESV-KTHA-AT 403

  Fly   898 TVETIEQSLFVVCLDNCVPTPKGEER-------IVQAHQLLHGGGVRQNSANRWMDKTIQLIVNP 955
            .:|.:|.:.|.|.||:   .|.|..|       ...||.||.|.|     .:||.||:..|||..
Mouse   404 ALEAVEGAAFFVSLDS---EPAGLTREDPAASLDAYAHALLAGRG-----HDRWFDKSFTLIVFS 460

  Fly   956 NGLAGFCYEHSPADCQPLAMLMDF-VQLKVTEPNYGCEG-CEADKKVTSNLLKFQP------VNE 1012
            ||..|...|||.|||.....|.:| :..:..:..|..:| |:.....|..    ||      :.|
Mouse   461 NGKLGLSVEHSWADCPVSGHLWEFTLATECFQLGYATDGHCKGHPDPTLP----QPQRLQWDLPE 521

  Fly  1013 CINLWLCQARRNIQRIVSQLQMNVINFECYGKCFIKAQGLNPDSYIQMALSLAYYSMYGKIPAQY 1077
            .|...:..|.|..:.:...:..:|..|..:||.|||...::.||:||:.|.||::...|:....|
Mouse   522 QIQPSISLALRGAKTLSGNIDCHVFPFSHFGKSFIKCCHVSSDSFIQLVLQLAHFRDRGQFCLTY 586

  Fly  1078 ESAHLRIFHEGRTETIRSTSNESKTFLLAMQSEKASMSEKLAALQKAVDAHEKLIKEAINGQGID 1142
            |||..|:|.||||||:||.:.|:..|:.||.: |.:....||..:.|||.|:.|:|.|::|||||
Mouse   587 ESAMTRLFLEGRTETVRSCTREACQFVRAMDN-KETDQHCLALFRVAVDKHQALLKAAMSGQGID 650

  Fly  1143 RHLFGLQEMALEKGMPIPEFFRSKGYVRSVTFQLFTSQV----------------ATSNEGFMAY 1191
            ||||.|..|:....|..|  |.::  |:|..:.|.||||                .:|..||   
Mouse   651 RHLFALYIMSRLLHMQSP--FLTQ--VQSQQWLLSTSQVPVQQTHLIDVHNYPDYVSSGGGF--- 708

  Fly  1192 GPLLSDGYGVCY-NPKESKITFAISAWKSCKEINTIRFAKAIKKSLNDMRKLILLTGGERAGEH 1254
            ||....|||:.| ...|:.|||.||:.||..|.::.|..:.|:.:|.|:..|.      |.|:|
Mouse   709 GPAHDHGYGISYIFMGENAITFHISSKKSSTETDSHRLGQHIENALLDVASLF------RVGQH 766

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG5122NP_609601.1 Carn_acyltransf 665..1240 CDD:279140 191/629 (30%)
Cpt1cNP_001344599.1 CPT_N 1..46 CDD:318644
Carn_acyltransf 171..754 CDD:307070 186/618 (30%)
Coenzyme A binding. /evidence=ECO:0000250 552..564 5/11 (45%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D559299at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
32.920

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