DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG5122 and crata

DIOPT Version :9

Sequence 1:NP_609601.1 Gene:CG5122 / 34703 FlyBaseID:FBgn0032471 Length:1263 Species:Drosophila melanogaster
Sequence 2:NP_001027489.1 Gene:crata / 613081 XenbaseID:XB-GENE-996699 Length:625 Species:Xenopus tropicalis


Alignment Length:630 Identity:236/630 - (37%)
Similarity:356/630 - (56%) Gaps:39/630 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly   636 KPQKV--PKKCIKSEIRHLADANNDPNKKPELKKFPALPLKQSIASYLSSIEPFLNEEELKVEQK 698
            ||.::  |....|...|:||....       |...|..||:|::..||.:::|.::.||..:.:.
 Frog    11 KPVRLVKPVSLAKLPGRYLAHQEG-------LPCLPVPPLQQTLDKYLLALKPLVSLEEWSLTRV 68

  Fly   699 VAKKF-VDNEGAKLQQLLEEEAEGTDNWLTPRWTRSAYLTYQAPLTVFSSPGLSFPIQEFKDTND 762
            :.:.| ....|.:||:.||..|..|:|||:..|.::|||.|:.|:.|.|:||:..|.|:|:|...
 Frog    69 LVEDFRTSGVGERLQKGLERRARKTENWLSEWWLQTAYLEYRMPVVVHSNPGVVLPKQDFEDRQG 133

  Fly   763 FLNFTAKAIYGMCEFKQLVDQNKIPVVQMGKHQLDNSQFGKIFGTVRKPGRFCDTIEQYNDAD-- 825
            .|.|.||.|.|:.:||.:||...:||..:|...|..:|:.::..:.|.||...||:..|:.|.  
 Frog   134 QLRFAAKLIEGVLDFKTMVDNETLPVEYLGGKPLCMNQYYQMLSSCRIPGPKRDTVANYSQASKP 198

  Fly   826 --YIVVVYNNNYFKLPIYSQSGALLHAHTLRDALQDILECPIKVGKH-FGLLTHDNRSNWAEAYT 887
              :|.||:|..:|:|.:|:..|..|.:..:...|:.|....::..|. .|:||.::|::||:||.
 Frog   199 PTHITVVHNFQFFELDVYNSDGTPLTSDQIFTQLEKIWGTSLQTNKEPIGILTTNHRNSWAKAYN 263

  Fly   888 VLCRPHGNADTVETIEQSLFVVCLDNCVPTPKGEERIVQ---AHQLLHGGGVRQNSANRWMDKTI 949
            .|.:...|.::|.||::|:|.||||  .|.|:..:.:.|   |.|:|||||.|.||.|||.|||:
 Frog   264 NLIKDKTNKESVRTIQKSIFTVCLD--APIPRVSDDLYQSQVAAQMLHGGGSRWNSGNRWFDKTL 326

  Fly   950 QLIVNPNGLAGFCYEHSPADCQPLAMLMDFVQLKVTEPNYGCEGCEADKKVTSNL--------LK 1006
            |.||..:|..|..|||:||:..|:..|:|.|          .|..:..:.:.|.:        |:
 Frog   327 QFIVAEDGSCGLVYEHAPAEGPPIVALIDHV----------VEYTKRPELIRSPMMPLPMPKKLR 381

  Fly  1007 FQPVNECINLWLCQARRNIQRIVSQLQMNVINFECYGKCFIKAQGLNPDSYIQMALSLAYYSMYG 1071
            |....|..| .:.:|::|:..:|..|.:.|..|..:||.|.|::.|:||::||:||.|:||.||.
 Frog   382 FNITPEIKN-DIEKAKQNLNIMVHDLDVKVFVFSVFGKNFPKSEKLSPDAFIQLALQLSYYRMYK 445

  Fly  1072 KIPAQYESAHLRIFHEGRTETIRSTSNESKTFLLAMQSEKASMSEKLAALQKAVDAHEKLIKEAI 1136
            ::.|.||||.||:|..|||:||||.|.:|:.|:.||........||:..|:|||.||......||
 Frog   446 QVCATYESASLRMFRLGRTDTIRSASIDSENFVQAMDDPSKQNQEKVDLLRKAVQAHRAYTDMAI 510

  Fly  1137 NGQGIDRHLFGLQEMALEKGMPIPEFFRSKGYVRSVTFQLFTSQVATSNEGFMAYGPLLSDGYGV 1201
            ||..|||||.||:..|:|..:.:||.|....|..::.|.|.||||....:..|.:||::.|||||
 Frog   511 NGNAIDRHLLGLKLQAIEDLVSMPELFMDTSYAVAMHFNLSTSQVPAKTDCVMCFGPVVPDGYGV 575

  Fly  1202 CYNPKESKITFAISAWKSCKEINTIRFAKAIKKSLNDMRKLILLT 1246
            ||||.|..|.||:||:.||.|.|..|.|..::::|.||::|:..|
 Frog   576 CYNPMEDHINFAVSAFNSCAETNAARLAHYLERALCDMQQLVQRT 620

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG5122NP_609601.1 Carn_acyltransf 665..1240 CDD:279140 226/591 (38%)
crataNP_001027489.1 Carn_acyltransf 35..614 CDD:376382 226/591 (38%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 386 1.000 Domainoid score I801
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 1 1.000 - - H598
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D167256at33208
OrthoFinder 1 1.000 - - FOG0001049
OrthoInspector 1 1.000 - - mtm9520
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X630
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
66.010

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