DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG5122 and ChAT

DIOPT Version :9

Sequence 1:NP_609601.1 Gene:CG5122 / 34703 FlyBaseID:FBgn0032471 Length:1263 Species:Drosophila melanogaster
Sequence 2:NP_477004.5 Gene:ChAT / 42249 FlyBaseID:FBgn0000303 Length:721 Species:Drosophila melanogaster


Alignment Length:658 Identity:200/658 - (30%)
Similarity:331/658 - (50%) Gaps:60/658 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly   640 VPKKCIKSEIRHLADANNDPNKKPELKKFPALPLKQSIASYLSSIEPFLNEEELKVEQKVAKKFV 704
            :|||.:.:     |::.::......|.|.|...|.:::|.|:.::||.....:|:..:::.::|.
  Fly    68 IPKKWLST-----AESVDEFGFPDTLPKVPVPALDETMADYIRALEPITTPAQLERTKELIRQFS 127

  Fly   705 DNE--GAKLQQLLEEEAEGTDNWLTPRWTRSAYLTYQAPLTVFSSPGLSFPIQEFKDTNDFLNFT 767
            ..:  ||:|.|.|.::.|..|||....|....|:..:.||.:.|:||:.||.:.||..:|..:|.
  Fly   128 APQGIGARLHQYLLDKREAEDNWAYYYWLNEMYMDIRIPLPINSNPGMVFPPRRFKTVHDVAHFA 192

  Fly   768 AKAIYGMCEFKQLVDQNKIPVVQMGKHQ----LDNSQFGKIFGTVRKPG-----RFCDTIEQYND 823
            |:.:.|:...::::|..::|:.:....:    |..:|:.::.|:.|:||     :|..:.|:.||
  Fly   193 ARLLDGILSHREMLDSGELPLERAASREKNQPLCMAQYYRLLGSCRRPGVKQDSQFLPSRERLND 257

  Fly   824 AD-YIVVVYNNNYFKLPIY-SQSGALLHAHTLRDALQDILECPIKVGK--HFGLLTHDNRSNWAE 884
            .| ::||:..|..:.:.:. |..|.|..:......|..:.:.|....|  ..||||.:.||.||.
  Fly   258 EDRHVVVICRNQMYCVVLQASDRGKLSESEIASQILYVLSDAPCLPAKPVPVGLLTAEPRSTWAR 322

  Fly   885 AYTVLCRPHGNADTVETIEQSLFVVCLD-------------NCVPT---PKGEERIVQAHQLLHG 933
            ...:|.....|...:|.||.:..|:|||             ...||   ....:....||:::||
  Fly   323 DREMLQEDERNQRNLELIETAQVVLCLDEPLAGNFNARGFTGATPTVHRAGDRDETNMAHEMIHG 387

  Fly   934 GGVRQNSANRWMDKTIQLIVNPNGLAGFCYEHSPADCQPLAMLMDFVQLKVTEPNYGCEGCEADK 998
            ||...||.|||.|||:|||:..:|..|.|||||.::...:..|::.:..|:.|......|.....
  Fly   388 GGSEYNSGNRWFDKTMQLIICTDGTWGLCYEHSCSEGIAVVQLLEKIYKKIEEHPDEDNGLPQHH 452

  Fly   999 KVTSNLLKFQPVNECINLWLCQARRNIQRIVSQLQMNVINFECYGKCFIKAQGLNPDSYIQMALS 1063
            ......|::. |...:.|...||.:::.:.:..|...|..::.|||.|||:..::||.|||:||.
  Fly   453 LPPPERLEWH-VGPQLQLRFAQASKSVDKCIDDLDFYVYRYQSYGKTFIKSCQVSPDVYIQLALQ 516

  Fly  1064 LAYYSMYGKIPAQYESAHLRIFHEGRTETIRSTSNESKTFLLAM--------------QSEKASM 1114
            ||:|.:||::.|.||||..|.|..||.:.||:.|.|:..:..||              :.|:.|.
  Fly   517 LAHYKLYGRLVATYESASTRRFLHGRVDCIRAASTEALEWAKAMCQGEGANVPLESDREDEEESR 581

  Fly  1115 SEKLAALQK---------AVDAHEKLIKEAINGQGIDRHLFGLQEMALEKGMPIPEFFRSKGYVR 1170
            ..|.:...|         ||....:::.:.|.|.|||..|.||:|.::|....:.|.|:.:.|:.
  Fly   582 KVKFSIYSKDHLRELFRCAVARQTEVMVKNILGNGIDIPLLGLREASIEVTGEMHELFKDESYII 646

  Fly  1171 SVTFQLFTSQVATSNEGFMAYGPLLSDGYGVCYNPKESKITFAISAWKSCKEINTIRFAKAIKKS 1235
            |..|.|.|||||.|.:.||.|||:...|||..|||...:|.|.:||:.||::.:..|:||:::.|
  Fly   647 SQCFLLSTSQVACSTDSFMGYGPVTPRGYGCSYNPHPEQIVFCVSAFYSCEDTSASRYAKSLQDS 711

  Fly  1236 LNDMRKLI 1243
            |:.||.|:
  Fly   712 LDIMRDLL 719

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG5122NP_609601.1 Carn_acyltransf 665..1240 CDD:279140 193/628 (31%)
ChATNP_477004.5 Carn_acyltransf 88..716 CDD:279140 193/628 (31%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45469036
Domainoid 1 1.000 234 1.000 Domainoid score I397
eggNOG 1 0.900 - - E1_KOG3717
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D15298at7147
OrthoFinder 1 1.000 - - FOG0001049
OrthoInspector 1 1.000 - - otm24513
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR22589
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X630
98.850

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