DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG5122 and Cpt1c

DIOPT Version :9

Sequence 1:NP_609601.1 Gene:CG5122 / 34703 FlyBaseID:FBgn0032471 Length:1263 Species:Drosophila melanogaster
Sequence 2:XP_006229128.1 Gene:Cpt1c / 308579 RGDID:1305384 Length:802 Species:Rattus norvegicus


Alignment Length:670 Identity:198/670 - (29%)
Similarity:319/670 - (47%) Gaps:107/670 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly   661 KKPELKKFP-ALP------LKQSIASYLSSIEPFLNEEELKVEQKVAKKFVDNEGAKLQQLLEEE 718
            :.|.|..|. |||      .::::..||.|:.|.|.::.......:|..|:..:..:||..|:.:
  Rat   160 RHPRLFSFQRALPRQPVPGAQETVRKYLESMRPVLRDDAFDSVVALANDFLRLQAPRLQLYLQLK 224

  Fly   719 AEGTDNWLTPRWTRSAYLTYQAPLT----------VFSSPGLSFPIQEFKDTNDFLNFTAKAIYG 773
            :....|:::..|....||..:..|.          ::.:|   .|:|..:..|        |::.
  Rat   225 SWCASNYVSDWWEEFVYLRSRGSLVNSTYYMMQDFLYVTP---TPLQAARAGN--------AVHT 278

  Fly   774 MCEFKQLVDQNKI-PVVQMGKHQLDNSQFGKIFGTVRKPGRFCDTIEQYNDADYIVVVYNNNYFK 837
            :..::.|:::.:| |.:.||...|.::|:.::|.|.|.||...|.:....|:.::.|.:...:|:
  Rat   279 LLLYRHLLNRQEIPPTLLMGMRPLCSAQYERMFNTTRIPGVEKDYLCHLQDSQHVAVFHQGRFFR 343

  Fly   838 LPIYSQSGALLHAHTLRDALQDILE-----CPIKVGKHFGLLTHDNRSNWAEAYTVLCRPHGNAD 897
            :..:|.:| ||....|....|.||:     ||::  :|...||...||.||:....: :.|. |.
  Rat   344 VGTHSSNG-LLSPRALEQQFQYILDDPSPACPLE--EHLAALTAAPRSMWAQVRESV-KTHA-AT 403

  Fly   898 TVETIEQSLFVVCLDNCVPTPKGEER-------IVQAHQLLHGGGVRQNSANRWMDKTIQLIVNP 955
            .:||:|.:.|.|.||:   .|.|..|       ...||.||.|.|     .:||.||:..|||..
  Rat   404 ALETVEGAAFFVSLDS---EPAGLTRENPAASLDTYAHTLLTGQG-----HDRWFDKSFTLIVFS 460

  Fly   956 NGLAGFCYEHSPADCQPLAMLMDF-VQLKVTEPNYGCEG-CEA--------DKKVTSNLLK-FQP 1009
            ||..|...|||.|||.....|.:| :..:..:..|..:| |:.        .:::..:|.| .||
  Rat   461 NGKLGLSVEHSWADCPVAGHLWEFTLATECFQLGYATDGHCKGHPDPALPKPQRLQWDLPKQIQP 525

  Fly  1010 VNECINLWLCQARRNIQRIVSQLQMNVINFECYGKCFIKAQGLNPDSYIQMALSLAYYSMYGKIP 1074
               .|:|    |.|..:.:...:..:|..|..:||.|||...::.||:||:.|.||::...|:..
  Rat   526 ---SISL----ALRGAKTLSGNIDCHVFPFFHFGKSFIKGCHVSSDSFIQLVLQLAHFRDRGQFC 583

  Fly  1075 AQYESAHLRIFHEGRTETIRSTSNESKTFLLAMQSEKASMSEKLAALQKAVDAHEKLIKEAINGQ 1139
            ..||||..|:|.||||||:||.:.|:..|:.||::::.:..:.||..::|||.|:.|:|.|::||
  Rat   584 LTYESAMTRLFLEGRTETVRSCTREACQFVRAMENKERTDQQCLALFREAVDKHQALLKAAMSGQ 648

  Fly  1140 GIDRHLFGLQEMALEKGMPIPEFFRSKGYVRSVTFQLFTSQV----------------ATSNEGF 1188
            |||||||.|..|:....|..|  |.::  |:|..:.|.|||:                .:|..||
  Rat   649 GIDRHLFALYIMSRLLHMQSP--FLTQ--VQSQQWLLSTSQIPVQQTHLFDVHNYPDYVSSGGGF 709

  Fly  1189 MAYGPLLSDGYGVCY-NPKESKITFAISAWKSCKEINTIRFAKAIKKSLNDMRKLI--------L 1244
               ||....||||.| ...|:.|:|.||:.:|..|.::.|..:.|:.:|.|:..|.        .
  Rat   710 ---GPAHDHGYGVSYIFMGENAISFHISSKQSSTETDSHRLGQHIEDALLDVASLFQAGQQFKRQ 771

  Fly  1245 LTG-GERAG--EHPCKCETV 1261
            .|| ||.:|  .....|:||
  Rat   772 FTGLGESSGWKYSNLSCKTV 791

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG5122NP_609601.1 Carn_acyltransf 665..1240 CDD:279140 188/632 (30%)
Cpt1cXP_006229128.1 CPT_N 1..46 CDD:293093
Carn_acyltransf 171..758 CDD:279140 184/624 (29%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D559299at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.920

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