DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG5122 and Cpt1b

DIOPT Version :10

Sequence 1:NP_609601.1 Gene:CG5122 / 34703 FlyBaseID:FBgn0032471 Length:1263 Species:Drosophila melanogaster
Sequence 2:XP_006242242.1 Gene:Cpt1b / 25756 RGDID:2397 Length:775 Species:Rattus norvegicus


Alignment Length:633 Identity:180/633 - (28%)
Similarity:298/633 - (47%) Gaps:68/633 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly   660 NKKPELKKF----PALPLKQ---SIASYLSSIEPFLNEEELKVEQKVAKKFVDNEGAKLQQLLEE 717
            :::|.|..|    |.||:..   :|..||.|:.|.|::|.....:.:||:|.|....:||:.|..
  Rat   161 SRRPMLYSFQTSLPKLPVPSVPATIHRYLDSVRPLLDDEAYFRMESLAKEFQDKIAPRLQKYLVL 225

  Fly   718 EAEGTDNWLTPRWTRSAYLTYQAPLTVFSS-PGLSFPIQEFKDTNDFLNFTAKAIYGMCEFKQLV 781
            ::....|:::..|....||..::|:.|.|: ..:.|.:  .|:|:.........::.|..:::.:
  Rat   226 KSWWATNYVSDWWEEYVYLRGRSPIMVNSNYYAMDFVL--IKNTSQQAARLGNTVHAMIMYRRKL 288

  Fly   782 DQNKI-PVVQMGKHQLDNSQFGKIFGTVRKPGRFCDTIEQYNDADYIVVVYNNNYFKLPIYSQSG 845
            |:.:| ||:.:|...:.:.|..::|.|.|.||:..|.::..:::.::.|.:...:||:.:| :..
  Rat   289 DREEIKPVMALGMVPMCSYQMERMFNTTRIPGKETDLLQHLSESRHVAVYHKGRFFKVWLY-EGS 352

  Fly   846 ALLHAHTLRDALQDILE--CPIKVGKH-FGLLTHDNRSNWAEAYTVLCRPHGNADTVETIEQSLF 907
            .||....|....|.||:  .|.:.|:. ...||...|..||||.........|..:::|||::.|
  Rat   353 CLLKPRDLEMQFQRILDDTSPPQPGEEKLAALTAGGRVEWAEARQKFFSSGKNKMSLDTIERAAF 417

  Fly   908 VVCLD---NCVPTPKGEERI-VQAHQLLHGGGVRQNSANRWMDKTIQLIVNPNGLAGFCYEHSPA 968
            .|.||   :|. .|..|..: :....||||     |..|||.||:..||...||..|...|||.|
  Rat   418 FVALDEDSHCY-NPDDEASLSLYGKSLLHG-----NCYNRWFDKSFTLISCKNGQLGLNTEHSWA 476

  Fly   969 DCQPLAMLMDFV------QLKVTEPNYGCEGCEADKKVTSNLLKFQPVNECINLWLCQARRNIQR 1027
            |...:..|.:||      .|..||..: |.|....|......:::....:|..     |..|..:
  Rat   477 DAPIIGHLWEFVLATDTFHLGYTETGH-CVGEPNTKLPPPQRMQWDIPEQCQT-----AIENSYQ 535

  Fly  1028 IVSQL----QMNVINFECYGKCFIKAQGLNPDSYIQMALSLAYYSMYGKIPAQYESAHLRIFHEG 1088
            :...|    ::....|..:||..||....:||:::|:||.||::...||....||::..|:|.||
  Rat   536 VAKALADDVELYCFQFLPFGKGLIKKCRTSPDAFVQIALQLAHFRDKGKFCLTYEASMTRMFREG 600

  Fly  1089 RTETIRSTSNESKTFLLAMQSEKASMSEKLAALQKAVDAHEKLIKEAINGQGIDRHLFGLQEMAL 1153
            ||||:||.::||..|:.||.:......:.....:||.:.|:.:.:.|:.|.|||||||.|..::.
  Rat   601 RTETVRSCTSESTAFVRAMMTGSHKKQDLQDLFRKASEKHQNMYRLAMTGAGIDRHLFCLYIVSK 665

  Fly  1154 EKGMPIPEFFRSKGYVRSVTFQLFTSQVAT----------------SNEGFMAYGPLLSDGYGVC 1202
            ..|:..|  |..:  |.|..:.|.|||:..                :..||   ||:...||||.
  Rat   666 YLGVRSP--FLDE--VLSEPWSLSTSQIPQFQICMFDPKQYPNHLGAGGGF---GPVADHGYGVS 723

  Fly  1203 YN-PKESKITFAISAWKSCKEI---NTIRFAKAIKKSLNDMRKLILLT 1246
            |. ..|:.:.|.:|:..|..|.   |.:||...|:::|.|:..|..::
  Rat   724 YMIAGENTMFFHVSSKLSSSETFPQNALRFGNHIRQALLDIADLFKIS 771

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG5122NP_609601.1 PTZ00449 <299..668 CDD:185628 2/7 (29%)
Carn_acyltransf 672..1234 CDD:459926 172/603 (29%)
Cpt1bXP_006242242.1 CPT_N 1..47 CDD:465132
Carn_acyltransf 176..759 CDD:459926 173/604 (29%)
Blue background indicates that the domain is not in the aligned region.

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