DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG5122 and Cpt2

DIOPT Version :9

Sequence 1:NP_609601.1 Gene:CG5122 / 34703 FlyBaseID:FBgn0032471 Length:1263 Species:Drosophila melanogaster
Sequence 2:NP_037062.1 Gene:Cpt2 / 25413 RGDID:2398 Length:658 Species:Rattus norvegicus


Alignment Length:634 Identity:163/634 - (25%)
Similarity:282/634 - (44%) Gaps:94/634 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly   665 LKKFPALPLKQSIASYLSSIEPFLNEEELKVEQKVAKKFVDNEGAKLQQ--LLEEEAEGTDNWLT 727
            |.:.|...|:.::..||::.:|.|::.:.:..:.:.|.|....|.:|..  |.:::.....::::
  Rat    49 LPRLPIPKLEDTMKRYLNAQKPLLDDSQFRRTEALCKNFETGVGKELHAHLLAQDKQNKHTSYIS 113

  Fly   728 PRWTRSAYLTYQAPLTVFSSPGLSFPIQEFKDTNDFL----NFTAKAI-------YGMCE----- 776
            ..|. ..|||.:..:.:..:|.::|......:.||.|    |.|..|:       .|:.|     
  Rat   114 GPWF-DMYLTARDSIVLNFNPFMAFNPDPKSEYNDQLTRATNLTVSAVRFLKTLQAGLLEPEVFH 177

  Fly   777 ----------FKQLVDQNKIP-------VVQMGKHQLDNSQFGKIFGTVR--KPGR---FCDTIE 819
                      ||:|:  ..:|       ...:..:.||.||:.::|.:.|  :|.|   |.||  
  Rat   178 LNPSKSDTDAFKRLI--RFVPPSLSWYGAYLVNAYPLDMSQYFRLFNSTRIPRPNRDELFTDT-- 238

  Fly   820 QYNDADYIVVVYNNNYFKLPIYSQSGAL-----LHAHTLRDALQD---ILECPIKVGKHFGLLTH 876
               .|.:::|:...:::...:..|.|.:     :.|| |:..|.|   :.|.|:      ..||.
  Rat   239 ---KARHLLVLRKGHFYVFDVLDQDGNIVNPLEIQAH-LKYILSDSSPVPEFPV------AYLTS 293

  Fly   877 DNRSNWAEAYTVLCRPHGNADTVETIEQSLFVVCLDNCVPTPKGEERIVQAHQLLHGGGVRQNSA 941
            :||..|||....|.. .||.:|::.::.::|.:|||: .|.   ::.|..:|.:|||.|     .
  Rat   294 ENRDVWAELRQKLIF-DGNEETLKKVDSAVFCLCLDD-FPM---KDLIHLSHTMLHGDG-----T 348

  Fly   942 NRWMDKTIQLIVNPNGLAGFCYEHSPADCQPLAML-------MDFVQLKVTEPNYGCEGCEADKK 999
            |||.||:..|||..:|.|...:|||..|  .:|:|       .|..|.....|.  .:....:..
  Rat   349 NRWFDKSFNLIVAEDGTAAVHFEHSWGD--GVAVLRFFNEVFRDSTQTPAITPQ--SQPAATNSS 409

  Fly  1000 VTSNLLKFQPVNECINLWLCQARRNIQRIVSQLQMNVINFECYGKCFIKAQGLNPDSYIQMALSL 1064
            .:...|.|. ::..:...:..|:......|..|.::.|.|:..||.|:|.:.|:||:..|:|..:
  Rat   410 ASVETLSFN-LSGALKAGITAAKEKFDTTVKTLSIDSIQFQRGGKEFLKKKQLSPDAVAQLAFQM 473

  Fly  1065 AYYSMYGKIPAQYESAHLRIFHEGRTETIRS----TSNESKTFLLAMQSEKASMSEKLAALQKAV 1125
            |:...||:..|.|||.....|..|||||||.    |...|:.|:  ....|.|:.|....:.:..
  Rat   474 AFLRQYGQTVATYESCSTAAFKHGRTETIRPASIFTKRCSEAFV--RDPSKHSVGELQHMMAECS 536

  Fly  1126 DAHEKLIKEAINGQGIDRHLFGLQEMALEKGMPIPEFFRSKGYVRSVTFQLFTSQVATSNEGFMA 1190
            ..|.:|.|||..|||.||||:.|:.:|..:|:.:||.:....|.:.....|.||.:.:.......
  Rat   537 KYHGQLTKEAAMGQGFDRHLYALRYLATARGLNLPELYLDPAYQQMNHNILSTSTLNSPAVSLGG 601

  Fly  1191 YGPLLSDGYGVCYNPKESKITFAISAWKSCKEINTIRFAKAIKKSLNDM 1239
            :.|::.||:|:.|...:..|...:|::..   .|...|...::|.|.|:
  Rat   602 FAPVVPDGFGIAYAVHDDWIGCNVSSYSG---RNAREFLHCVQKCLEDI 647

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG5122NP_609601.1 Carn_acyltransf 665..1240 CDD:279140 163/634 (26%)
Cpt2NP_037062.1 Carn_acyltransf 49..648 CDD:279140 163/634 (26%)
Coenzyme A binding. /evidence=ECO:0000250 452..464 5/11 (45%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D167256at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
32.920

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