DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG5122 and cpt-3

DIOPT Version :9

Sequence 1:NP_609601.1 Gene:CG5122 / 34703 FlyBaseID:FBgn0032471 Length:1263 Species:Drosophila melanogaster
Sequence 2:NP_497498.2 Gene:cpt-3 / 190055 WormBaseID:WBGene00021703 Length:722 Species:Caenorhabditis elegans


Alignment Length:707 Identity:168/707 - (23%)
Similarity:283/707 - (40%) Gaps:156/707 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly   611 KSPKPLSKPQYSKRSNCEVKTQCAEKPQKVPKKCIKSEIRHLADANNDPNKKPE-------LKKF 668
            :|||   ||.|:                .:....:|..:.|:|        .|:       |...
 Worm    94 ESPK---KPSYA----------------TIVWGTVKKILSHVA--------PPQLSSCDRLLSNL 131

  Fly   669 PALPLKQSIASYLSSIEPFLNEEELKVEQKVAKKFVDNEGAKLQQLLEEEAEGTDNWLTPRWTRS 733
            |...|:.::..|..|::..::|||.......:.:|:.:||..||:........|||::|..|.:.
 Worm   132 PLPRLEDTVTRYTDSMKFVISEEEHNNLIATSTQFLSHEGRTLQRFAWLLHLITDNYVTWFWEKY 196

  Fly   734 AYLTYQAPLTVFSSPGLSFPIQEFKDTNDFLNFTAKAI-YGMCEFKQLVDQNKIPVVQ------- 790
            .|...:.||.:.||                   |.:.: ||..:..|:....::..::       
 Worm   197 IYYAGRYPLPIISS-------------------TCQCVLYGEDDLTQVYQVARLLYIETLANLSV 242

  Fly   791 -------MGKHQLDNSQFGKIFGTVRKPGRFCDTIEQYNDADYIVVVYNNNYFKLPIYSQSGALL 848
                   :|...:....:..|:...|.||...|..:....:.:.:||:...::|:....:.|.| 
 Worm   243 DRQDYLAVGDGLMSTRHYRNIYNGSRVPGAEIDNFQWNPPSRHALVVHKGTWYKVDTCDEDGRL- 306

  Fly   849 HAHTLRDALQDILECPIKVGKHFGL------LTHDNRSNWAE--AYTVLCRPHGNADTVETIEQS 905
              :::.:..:.:.|...:..|..|.      ||.|.|:.|::  ....|...| |...:|.||.|
 Worm   307 --YSVNELAKIVSELTTRQDKSTGFLCKISSLTADRRTEWSKNRRKFFLNNAH-NKKLLEVIETS 368

  Fly   906 LFVVCLDNC---VPTPKGEERIVQAHQLLHGGGVRQNSANRWMDKTIQLIVNPNGLAGFCYEHSP 967
            .:|:.:|..   |.|  .::..|....:|.|.|     .|||.|||:...:..||..|...||||
 Worm   369 QYVISMDTAKWGVET--SDKMSVYMKDMLAGDG-----TNRWFDKTMNYAICANGRGGATGEHSP 426

  Fly   968 ADCQPLAMLMDFVQLKVTEPNYGCEG-CEADKKV-----------------TSNLLKF------- 1007
            ||    ...||.|          ||. ...||::                 .||.||.       
 Worm   427 AD----GAEMDHV----------CENFLNLDKQILKSPSKEEQLEIAKLDEPSNYLKLAEKLEFE 477

  Fly  1008 ------QPVNECINLWLCQARRNIQRIVSQLQMNVINFECYGKCFIKAQGLNPDSYIQMALSLAY 1066
                  :.|..|....        .:.|:.|.::.|.|..:||..:|..|::||.::|||:.|||
 Worm   478 VEEGLEEEVERCYEAH--------TKAVADLHVHSIIFLDFGKGRLKKCGISPDGFVQMAIQLAY 534

  Fly  1067 YSMYGKIPAQYESAHLRIFHEGRTETIRSTSNESKTFLLAMQSEKASMSEKLAALQKAVDAHEKL 1131
            :...||....||:..:|.:...||||:|..::.|...:.||..|.:|...:...|::|.:.|...
 Worm   535 FEDQGKFTQTYETGSIRFYANSRTETVRPVTSASCKLVCAMLDETSSKQTRRQLLKEACEVHVNN 599

  Fly  1132 IKEAINGQGIDRHLFGLQEMALEKGM----PIPEFFRSKGYVRSVT-FQLFTSQVA--TSNEGFM 1189
            .||.:.|.|.|||||.|  ..:.||:    |..:||.|:.::.|.: ....|:.:|  ||....|
 Worm   600 CKEVMLGNGFDRHLFVL--CVIAKGLGYNSPFLDFFSSQKWLLSTSNIPNMTNSIAEDTSVNNIM 662

  Fly  1190 ---AYGPLLSDGYGVCYN-PKESKITFAISAWKSCKEINTIRFAKAIKKSLNDMRKL 1242
               ::|.:..||||:||. .....|...|:::.|.:..::.|....:|.:.:.:..|
 Worm   663 LGGSFGAVAQDGYGICYRFGGNHAILVHITSYHSSELTDSERIGNRLKSAFHRLAGL 719

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG5122NP_609601.1 Carn_acyltransf 665..1240 CDD:279140 157/642 (24%)
cpt-3NP_497498.2 Carn_acyltransf 128..716 CDD:376382 157/641 (24%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D559299at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.920

Return to query results.
Submit another query.