DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG5122 and cpt-4

DIOPT Version :9

Sequence 1:NP_609601.1 Gene:CG5122 / 34703 FlyBaseID:FBgn0032471 Length:1263 Species:Drosophila melanogaster
Sequence 2:NP_504348.1 Gene:cpt-4 / 178889 WormBaseID:WBGene00019644 Length:748 Species:Caenorhabditis elegans


Alignment Length:632 Identity:162/632 - (25%)
Similarity:291/632 - (46%) Gaps:81/632 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly   663 PEL----KKFPALP---LKQSIASYLSSIEPFLNEEELKVEQKVAKKFVDNEGAKLQQLLEEEAE 720
            |:|    :..|.||   |:.::..|:.|::..::||:.....::::|||.|||..:|:......:
 Worm   132 PQLSSCDRLLPNLPLPALQDTVDRYVDSMKHLMSEEDYDQLLEMSRKFVSNEGRSIQRYAWFLHK 196

  Fly   721 GTDNWLTPRWTRSAYLTYQAPLTVFSSP------GLSFPIQEFKDTNDFLNFTAKAIYGMCEFKQ 779
            .|||::|..|.:..|:..:.||.:.||.      |.|..||.::        .|:.||.......
 Worm   197 FTDNYVTSLWEQYIYMAGRYPLLINSSVAQCTMYGESDLIQAYQ--------VARLIYIETIANL 253

  Fly   780 LVDQNKIPVVQMGKHQLDNSQFGKIFGTVRKPGRFCDTIEQYNDADYIVVVYNNNYFKLPIYSQS 844
            .:|:.|  .:.:|:..:....:..|:...|.||:..|:.:....|.::::|::..::|:.|...:
 Worm   254 ALDRQK--YMAIGEGLMSTRHYRNIYNGCRIPGKQYDSFQWNKPAKHVILVHDCTWYKVDICDSN 316

  Fly   845 GALLHAHTLRDALQDILECPIKVG---KHFGLLTHDNRSNW-AEAYTVLCRPHGNADTVETIEQS 905
            |.|.....|...:.:::....|..   ::...||.|.|:.| :...........|...::.||.:
 Worm   317 GQLYTVDQLAKIVAEVMGRDDKSKGYLRNIASLTTDRRTEWCSNRQKFFLENKHNQKLLQQIETA 381

  Fly   906 LFVVCLDN----CVPTPKGEERIVQAHQLLHGGGVRQNSANRWMDKTIQLIVNPNGLAGFCYEHS 966
            .||:.:|.    .|.|.:...:.::  .:|.|.|     :|||:|||:...|:.:|.||...|||
 Worm   382 QFVMSVDGDLNWGVETTEQLSKYMK--DMLAGSG-----SNRWVDKTMNYAVDASGRAGATGEHS 439

  Fly   967 PADCQPLAMLMDFV---------------QLKVTEPNYGCEGCEADKKVTSNLLKFQ-------P 1009
            |.|...|..|.:.|               ||::.:..:    .|.:....:..|.||       .
 Worm   440 PCDGAELDHLCENVLNVDKQVLVSPSTEEQLEIIKMTF----TEKNSLRLAQKLDFQEVDGMETE 500

  Fly  1010 VNECINLWLCQARRNIQRIVSQLQMNVINFECYGKCFIKAQGLNPDSYIQMALSLAYYSMYGKIP 1074
            ||.|.        ....:....|.|:.|.|..:||..:|..|::||.::|||:.||.|...||..
 Worm   501 VNRCF--------EQHHKASDDLHMHSIAFTDFGKGRVKKCGISPDGFLQMAIQLANYYDQGKFV 557

  Fly  1075 AQYESAHLRIFHEGRTETIRSTSNESKTFLLAMQSEKASMSEKLAALQKAVDAHEKLIKEAINGQ 1139
            ..||...:|.:...||||:|..::.|..|:.||.|::::..|:...|:||.:||.:..||.:.|:
 Worm   558 LTYEPGSVRFYANSRTETLRPVTDYSCKFVQAMLSDESTQKERRDLLKKACEAHVENCKEVMTGK 622

  Fly  1140 GIDRHLFGLQEMALEKGMPIP---EFFRSKGYVRSVTFQLFTSQV--ATSNEGFM---AYGPLLS 1196
            |:|||||.|..:|...|...|   |:...|..:.:......|:.|  ..|.:..|   ::|.:..
 Worm   623 GVDRHLFVLCVLAKGLGYSSPFLEEYANQKWLLSTSNIPNMTNSVDEDISEDNIMLGASFGAVAQ 687

  Fly  1197 DGYGVCYNPKESK-ITFAISAWKSCKEINTIRFAKAIKKSLNDMRKL 1242
            ||||:||....:: |...|:::.|....::.||.:.::::::.:..|
 Worm   688 DGYGICYRFAGNRAIMVHITSYHSSPATDSDRFGQHLREAIHTLADL 734

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG5122NP_609601.1 Carn_acyltransf 665..1240 CDD:279140 160/626 (26%)
cpt-4NP_504348.1 Carn_acyltransf 150..731 CDD:376382 155/609 (25%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D559299at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
32.920

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