DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG5122 and Cpt1a

DIOPT Version :9

Sequence 1:NP_609601.1 Gene:CG5122 / 34703 FlyBaseID:FBgn0032471 Length:1263 Species:Drosophila melanogaster
Sequence 2:XP_011246904.1 Gene:Cpt1a / 12894 MGIID:1098296 Length:798 Species:Mus musculus


Alignment Length:636 Identity:187/636 - (29%)
Similarity:301/636 - (47%) Gaps:69/636 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly   661 KKPELKKF----PALP---LKQSIASYLSSIEPFLNEEELKVEQKVAKKFVDNEGAKLQQLLEEE 718
            :||.|..|    |.||   :|.:::.||.|:.|.:.|.:.:....:|:.|..|.|.|||..|:.:
Mouse   185 RKPMLYSFQTSLPRLPVPAVKDTVSRYLESVRPLMKEGDFQRMTALAQDFAVNLGPKLQWYLKLK 249

  Fly   719 AEGTDNWLTPRWTRSAYLTYQAPLTVFSSPGLSFPIQEFKDTNDFLNFTAKA---IYGMCEFKQL 780
            :....|:::..|....||..:.|:.|.|:   .:.::....|...:. .|:|   |:.:..:::.
Mouse   250 SWWATNYVSDWWEEYIYLRGRGPIMVNSN---YYAMEMLYITPTHIQ-AARAGNTIHAILLYRRT 310

  Fly   781 VDQNKI-PVVQMGKH-QLDNSQFGKIFGTVRKPGRFCDTIEQYNDADYIVVVYNNNYFKLPIYSQ 843
            ||:.:: |:..:|.. .|.::|:.::|.|.|.||...|||:...|:.:|||.:...|||:.:| .
Mouse   311 VDREELKPIRLLGSTIPLCSAQWERLFNTSRIPGEETDTIQHVKDSRHIVVYHRGRYFKVWLY-H 374

  Fly   844 SGALLHAHTLRDALQDILEC---PIKVGKHFGLLTHDNRSNWAEAYTVLCRPHGNADTVETIEQS 905
            .|.||....|...:|.||:.   |.........||..:|..||:..........|..:::.:|::
Mouse   375 DGRLLRPRELEQQMQQILDDTSEPQPGEAKLAALTAADRVPWAKCRQTYFARGKNKQSLDAVEKA 439

  Fly   906 LFVVCLDNCVPTPKGEERIVQ----AHQLLHGGGVRQNSANRWMDKTIQLIVNPNGLAGFCYEHS 966
            .|.|.||......:.|:....    |..||||     ...:||.||:|..:|..|...|...|||
Mouse   440 AFFVTLDESEQGYREEDPEASIDSYAKSLLHG-----RCFDRWFDKSITFVVFKNSKIGINAEHS 499

  Fly   967 PADCQPLAMLMDFVQ-LKVTEPNYGCEG-CEADK-----KVTSNLLKFQPVNEC---INLWLCQA 1021
            .||...:..|.::|. ..|.:..|..:| |:.||     |.|.  |::....||   |...|..|
Mouse   500 WADAPIVGHLWEYVMATDVFQLGYSEDGHCKGDKNPNIPKPTR--LQWDIPGECQEVIETSLSSA 562

  Fly  1022 RRNIQRIVSQLQMNVINFECYGKCFIKAQGLNPDSYIQMALSLAYYSMYGKIPAQYESAHLRIFH 1086
                ..:.:.:.::...|:.:||..||....:||::||:||.||:|...||....||::..|:|.
Mouse   563 ----SFLANDVDLHSFPFDTFGKGLIKKCRTSPDAFIQLALQLAHYKDMGKFCLTYEASMTRLFR 623

  Fly  1087 EGRTETIRSTSNESKTFLLAMQSEKASMSEKLAALQKAVDAHEKLIKEAINGQGIDRHLFGLQEM 1151
            ||||||:||.:.||..|:|||.....:..::....:.|.:.|:.|.:.|:.|.|||||||.|  .
Mouse   624 EGRTETVRSCTTESCNFVLAMMDPTTTAEQRFKLFKIACEKHQHLYRLAMTGAGIDRHLFCL--Y 686

  Fly  1152 ALEKGMPIPEFFRSKGYVRSVTFQLFTSQV----------------ATSNEGFMAYGPLLSDGYG 1200
            .:.|.:.:...|..:  |.|..::|.|||.                .:...||   ||:..||||
Mouse   687 VVSKYLAVDSPFLKE--VLSEPWRLSTSQTPQQQVELFDFEKYPDYVSCGGGF---GPVADDGYG 746

  Fly  1201 VCY-NPKESKITFAISAWKSCKEINTIRFAKAIKKSLNDMRKLILLTGGER 1250
            |.| ...|:.|.|.||:..|..|.::.||.|.:::::.|:..|..||...:
Mouse   747 VSYIIVGENFIHFHISSKFSSPETDSHRFGKHLRQAMMDIITLFGLTANSK 797

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG5122NP_609601.1 Carn_acyltransf 665..1240 CDD:279140 182/620 (29%)
Cpt1aXP_011246904.1 CPT_N 26..71 CDD:374569
Carn_acyltransf 196..786 CDD:376382 179/612 (29%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D559299at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
32.920

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