DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG5122 and Chat

DIOPT Version :9

Sequence 1:NP_609601.1 Gene:CG5122 / 34703 FlyBaseID:FBgn0032471 Length:1263 Species:Drosophila melanogaster
Sequence 2:NP_034021.1 Gene:Chat / 12647 MGIID:88392 Length:645 Species:Mus musculus


Alignment Length:628 Identity:224/628 - (35%)
Similarity:320/628 - (50%) Gaps:65/628 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly   659 PNKKP----------ELKKFPALPLKQSIASYLSSIEPFLNEEELKVEQKVAKKF--VDNEGAKL 711
            |.|.|          :|.|.|..||:|::|:||..::..:.||:.:..|.:.|:|  ....|..|
Mouse     8 PPKMPVQASSCEEVLDLPKLPVPPLQQTLATYLQCMQHLVPEEQFRKSQAIVKRFGAPGGLGETL 72

  Fly   712 QQLLEEEAEGTDNWLTPRWTRSAYLTYQAPLTVFSSPGLSFPIQEFKDTNDFLNFTAKAIYGMCE 776
            |:.|.|..|.|.||::..|....||..:..|.|.|||.:.|..|.|:||||.|.|.|..|.|:..
Mouse    73 QEKLLERQEKTANWVSEYWLNDMYLNNRLALPVNSSPAVIFARQHFQDTNDQLRFAASLISGVLS 137

  Fly   777 FKQLVDQNKIPVVQMGKHQLDN-----SQFGKIFGTVRKPGRFCDTIEQYN-----DADYIVVVY 831
            :|.|:|...|| ....|.||..     .|:.::|.:.|.||...||:....     :.::::|..
Mouse   138 YKALLDSQSIP-TDWAKGQLSGQPLCMKQYYRLFSSYRLPGHTQDTLVAQKSSIMPEPEHVIVAC 201

  Fly   832 NNNYFKLPIYSQSGALLHAHTLRDA-LQDILECPIKVGKH-------FGLLTHDNRSNWAEAYTV 888
            .|.:|.|.:      :::...|.:. |...|...:|:..:       .||||.|.||.||:|.||
Mouse   202 CNQFFVLDV------VINFRRLSEGDLFTQLRKIVKMASNEDERLPPIGLLTSDGRSEWAKARTV 260

  Fly   889 LCRPHGNADTVETIEQSLFVVCLDNCVPTPKGEERIVQAH---QLLHGGGVRQNSANRWMDKTIQ 950
            |.:...|.|:::.||:.:.:||||.     .|...:...|   |||||||...|.||||.||::|
Mouse   261 LLKDSTNRDSLDMIERCICLVCLDG-----PGTGDLSDTHRALQLLHGGGCSLNGANRWYDKSLQ 320

  Fly   951 LIVNPNGLAGFCYEHSPADCQPLAMLMDFVQLKVTEPNYGCEGCEADKKVTSNLLKFQPVNECIN 1015
            .:|..:|..|...||||.|...|....:.:...:...|        .|.|.::.:...|....:.
Mouse   321 FVVGRDGTCGVVCEHSPFDGIVLVQCTEHLLKHMMTGN--------KKLVRADSVSELPAPRRLR 377

  Fly  1016 LWLC---------QARRNIQRIVSQLQMNVINFECYGKCFIKAQGLNPDSYIQMALSLAYYSMYG 1071
             |.|         .:...:||||..|...|..|:.|||.|||.|..:||.:||:||.||||.:|.
Mouse   378 -WKCSPETQGHLASSAEKLQRIVKNLDFIVYKFDNYGKTFIKKQKCSPDGFIQVALQLAYYRLYQ 441

  Fly  1072 KIPAQYESAHLRIFHEGRTETIRSTSNESKTFLLAMQSEKASM--SEKLAALQKAVDAHEKLIKE 1134
            ::...||||.:|.|.|||.:.|||.:.|:..|:.||...||::  ||||..||:|:.|..:....
Mouse   442 RLVPTYESASIRRFQEGRVDNIRSATPEALAFVQAMTDHKAAVLASEKLQLLQRAIQAQTEYTVM 506

  Fly  1135 AINGQGIDRHLFGLQEMALEKGMPIPEFFRSKGYVRSVTFQLFTSQVATSNEGFMAYGPLLSDGY 1199
            ||.|..||.||..|:|:|.:.....||.|..:.|:.|..|.|.||||.|:.|.|..|||::.:||
Mouse   507 AITGMAIDNHLLALRELARDLCKEPPEMFMDETYLMSNRFILSTSQVPTTMEMFCCYGPVVPNGY 571

  Fly  1200 GVCYNPKESKITFAISAWKSCKEINTIRFAKAIKKSLNDMRKL 1242
            |.||||:...|||.||::..|||.:::.||:|:..||.|||.|
Mouse   572 GACYNPQPEAITFCISSFHGCKETSSVEFAEAVGASLVDMRDL 614

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG5122NP_609601.1 Carn_acyltransf 665..1240 CDD:279140 218/608 (36%)
ChatNP_034021.1 Carn_acyltransf 24..612 CDD:279140 218/608 (36%)
Coenzyme A binding. /evidence=ECO:0000250 413..425 6/11 (55%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3717
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D167256at33208
OrthoFinder 1 1.000 - - FOG0001049
OrthoInspector 1 1.000 - - otm43021
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X630
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
76.820

Return to query results.
Submit another query.