DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Ttc30 and flr

DIOPT Version :9

Sequence 1:NP_001097155.2 Gene:Ttc30 / 34702 FlyBaseID:FBgn0032470 Length:655 Species:Drosophila melanogaster
Sequence 2:XP_021327391.1 Gene:flr / 797829 ZFINID:ZDB-GENE-070117-2066 Length:667 Species:Danio rerio


Alignment Length:672 Identity:300/672 - (44%)
Similarity:424/672 - (63%) Gaps:37/672 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly     8 LREGHVTRTIYNLIKDKRYEDVIECIT-SFGEAANTRAGLSTLGHCYYHAQKYEEAATCYEQLCQ 71
            :::|..|.|:|.:||:.||.|.|..:: ...:...:||.||.||:||||.|.:..||.|||||.|
Zfish     6 IKDGEYTATVYKMIKEGRYGDAIHILSKEHQKHTKSRAALSLLGYCYYHMQDFTNAAECYEQLTQ 70

  Fly    72 LAPKEAKYRFYYAQSLYQAGIFADALRVLKQMGDQEDELREQCLQLQSAILYSSEDFAGAQSLLN 136
            |.|:...|:.|||||||.|..|.:|::....:.:.....:  .::||:||.|..||::||::|:.
Zfish    71 LHPEVEDYKLYYAQSLYGACAFPEAMKSTFLLDNTTSHTK--MIKLQAAIKYGEEDYSGAKTLVE 133

  Fly   137 QRAGGTADTLNDEGCLLFQADQHEAAVQRFQAALQVGGFNPLVAYNVALAHFQKKQRAQALDYTS 201
            |......|...|.||||::..:.|.|.::|.:::.|.|:.|.:|||:||.::..||.|.||.|.:
Zfish   134 QLPQEDPDYDVDLGCLLYKEGEFEEACKKFMSSMNVLGYQPDLAYNIALCYYSLKQYASALKYIA 198

  Fly   202 EIVERGMRNHPELGIGAQMDIPDGGARSVGNPITMAISGITQALNLKAAIEFQDGNEEAARDALL 266
            ||:|||:|.||||.||...:..|  .|||||.:.:..:.:.:|.|||||||:|..|..||::||.
Zfish   199 EIIERGIREHPELSIGMTTEGID--VRSVGNTLILHETALIEAFNLKAAIEYQLKNYAAAQEALT 261

  Fly   267 DLPPRAESELDPVTLHNMALTDVE-GPVAGLRKLAFLLELGAPSCPKETFANILLICCKNELYET 330
            |:|||:|.|||||||||.||.::: .|..|..||||||:..  ..|..||.|:||:.||.|.::.
Zfish   262 DMPPRSEEELDPVTLHNQALMNMDTKPTEGFEKLAFLLQQN--PFPPVTFGNLLLLYCKYEYFDL 324

  Fly   331 AADILAEHTDLTYKYLSQYLYELLDSLITAQTSAELAEKKLGTLASSLAGKLRSLAAKVQEVRAT 395
            |||:|||:..||||:|:.||||.||::||.||:.|.|.:|....|..|..:||.:..:|||.|..
Zfish   325 AADVLAENAHLTYKFLTPYLYEFLDAMITCQTAPEEAFRKFDENAGKLTEQLRKVTKQVQEARHN 389

  Fly   396 NEQQALRDALKDYEQALELYLPVVMARAWISWRDDDFVGAEREFHASAEFCSENSIWRLNAGHVL 460
            .:.::|:..::||::.||.|:||:||:|.|.|..:::...|:.||.|.|||:|:..|:||..|||
Zfish   390 RDDESLKKYVQDYDEVLEKYIPVLMAQAKIYWNRENYSMVEKIFHKSLEFCNEHDTWKLNVAHVL 454

  Fly   461 FMQGDKYNEAAAFYEPIVRQHSDD----------------IMSVSAAVLANLCVSYIMTFQNEEA 509
            |||.:||.||..||||||::|.::                |::|||.||||||||||||.|||||
Zfish   455 FMQDNKYKEAIGFYEPIVKKHYENLEQCNIQECPCKTKPSILNVSAIVLANLCVSYIMTSQNEEA 519

  Fly   510 EELMRKVEKAEEM--KGNLGKQYHHLCIVNLVVGTLYCAKSNYEFGLSRIAHALESGSGNRLYAD 572
            ||||||:||.||.  ..:..|:..||||||||:|||||||.||:||:||:..:||. ...:|..|
Zfish   520 EELMRKIEKEEEQISYDDPDKKIFHLCIVNLVIGTLYCAKGNYDFGISRVIKSLEP-YNKKLGTD 583

  Fly   573 TWLHVKHCILGLLTGMAKQNIILPYATVQEVLNFLRFCESYGLFTPANIFSATEQVPEEPL---- 633
            ||.:.|.|.|.||..|||..|:|..:.|||.:.||..||.||    .::.:..||..||..    
Zfish   584 TWFYAKRCFLSLLENMAKHMIMLRDSVVQECIQFLEHCELYG----KDVLAIIEQPLEEDRMHIG 644

  Fly   634 --TIGLEARKLRLLLIKLSEYD 653
              |:..|:|.::.|..:::.::
Zfish   645 KNTVTYESRLIKALFYEVTGWN 666

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ttc30NP_001097155.2 TPR_2 45..75 CDD:285020 18/29 (62%)
TPR repeat 46..71 CDD:276809 16/24 (67%)
TPR_11 49..102 CDD:290150 28/52 (54%)
TPR repeat 76..117 CDD:276809 11/40 (28%)
TPR repeat 129..171 CDD:276809 13/41 (32%)
TPR_11 143..205 CDD:290150 25/61 (41%)
TPR repeat 176..205 CDD:276809 14/28 (50%)
flrXP_021327391.1 TPR_11 21..>203 CDD:330823 72/183 (39%)
TPR repeat 41..71 CDD:276809 18/29 (62%)
TPR repeat 113..137 CDD:276809 11/23 (48%)
TPR repeat 173..202 CDD:276809 14/28 (50%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170576354
Domainoid 1 1.000 407 1.000 Domainoid score I671
eggNOG 1 0.900 - - E1_KOG4340
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H71716
Inparanoid 1 1.050 557 1.000 Inparanoid score I1070
OMA 1 1.010 - - QHG56317
OrthoDB 1 1.010 - - D219475at33208
OrthoFinder 1 1.000 - - FOG0004420
OrthoInspector 1 1.000 - - oto40559
orthoMCL 1 0.900 - - OOG6_103666
Panther 1 1.100 - - LDO PTHR20931
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R2861
SonicParanoid 1 1.000 - - X3134
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
ZFIN 00.000 Not matched by this tool.
1615.800

Return to query results.
Submit another query.