DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Ttc30 and Ttc30b

DIOPT Version :9

Sequence 1:NP_001097155.2 Gene:Ttc30 / 34702 FlyBaseID:FBgn0032470 Length:655 Species:Drosophila melanogaster
Sequence 2:NP_082511.1 Gene:Ttc30b / 72421 MGIID:1919671 Length:664 Species:Mus musculus


Alignment Length:665 Identity:309/665 - (46%)
Similarity:436/665 - (65%) Gaps:41/665 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly    10 EGHVTRTIYNLIKDKRYEDVIECITS-FGEAANTRAGLSTLGHCYYHAQKYEEAATCYEQLCQLA 73
            :|..|..:|.||:|.||.:.::.::: ...::.:|||||.|.:|||..|::|.||.|||||.|:.
Mouse    11 DGEFTAVVYRLIRDSRYSEAVQLLSAELQRSSRSRAGLSLLAYCYYRLQEFELAAECYEQLSQMH 75

  Fly    74 PKEAKYRFYYAQSLYQAGIFADALRVLKQMGDQEDELREQCLQLQSAILYSSEDFAGAQSLLNQ- 137
            |:..:||.|.||:||:|.::.:|.||...:.:...:.|  .|:||:||.||..|..||:||:.| 
Mouse    76 PELEQYRLYQAQALYKACLYPEATRVAFLLDNPAYQTR--VLRLQAAIKYSEGDLPGARSLVEQL 138

  Fly   138 -------RAGGTAD---TLNDEGCLLFQADQHEAAVQRFQAALQVGGFNPLVAYNVALAHFQKKQ 192
                   .:||.:|   .:| .||||::...:|||..:|.||||..|:.|.::||:|||::..:|
Mouse   139 LSGEGVEDSGGESDYDGQIN-LGCLLYKEGHYEAACSKFLAALQASGYQPDLSYNLALAYYSSRQ 202

  Fly   193 RAQALDYTSEIVERGMRNHPELGIGAQMDIPDGGARSVGNPITMAISGITQALNLKAAIEFQDGN 257
            .|.||.:.::|:|||:|.|||||:|...:..|  .|||||.|.:..:.:.:|.|||||||:|..|
Mouse   203 YAPALKHIADIIERGIRQHPELGVGMTTEGID--VRSVGNTIVLHQTALVEAFNLKAAIEYQLRN 265

  Fly   258 EEAARDALLDLPPRAESELDPVTLHNMALTDVEG-PVAGLRKLAFLLELGAPSCPKETFANILLI 321
            .|||::||.|:|||||.|||||||||.||.:::. |..|..||.|||:..  ..|.|||.|:||:
Mouse   266 YEAAQEALTDMPPRAEEELDPVTLHNQALMNMDAKPTEGFEKLQFLLQQN--PFPPETFGNLLLL 328

  Fly   322 CCKNELYETAADILAEHTDLTYKYLSQYLYELLDSLITAQTSAELAEKKLGTLASSLAGKLRSLA 386
            .||.|.::.|||:|||:..||||:|:.|||:.||::||.||:.|.|..||..||..|..:||.|.
Mouse   329 YCKYEYFDLAADVLAENAHLTYKFLTPYLYDFLDAMITCQTAPEEAFIKLDGLAGMLTEQLRKLT 393

  Fly   387 AKVQEVRATNEQQALRDALKDYEQALELYLPVVMARAWISWRDDDFVGAEREFHASAEFCSENSI 451
            .:||:.|.:.:.::.:.|:.:|::.||.|:||:||:|.|.|..:::...|:.|..|.|||:::.:
Mouse   394 IQVQDSRHSRDDESAKKAVNEYDETLEKYIPVLMAQAKIYWNFENYPMVEKIFRKSVEFCNDHDV 458

  Fly   452 WRLNAGHVLFMQGDKYNEAAAFYEPIVRQHSDDIMSVSAAVLANLCVSYIMTFQNEEAEELMRKV 516
            |:||..||||||.:||.||..||||||:::.|:|:||||.||||||||||||.|||||||||||:
Mouse   459 WKLNVAHVLFMQENKYKEAIGFYEPIVKKNYDNILSVSAIVLANLCVSYIMTSQNEEAEELMRKI 523

  Fly   517 EKAEEM--KGNLGKQYHHLCIVNLVVGTLYCAKSNYEFGLSRIAHALESGSGNRLYADTWLHVKH 579
            ||.||.  .|:..|:.:||||||||:|||||||.||:||:||:..:||. ...:|..|||.:.|.
Mouse   524 EKEEEQLSYGDPDKKIYHLCIVNLVIGTLYCAKGNYDFGISRVIKSLEP-YHKKLGTDTWYYAKR 587

  Fly   580 CILGLLTGMAKQNIILPYATVQEVLNFLRFCESYGLFTPANIFSATEQVPEEPL----------T 634
            |.|.||..|:|..|:|..:.:||.:.||..||.||...||        |.|:||          |
Mouse   588 CFLSLLENMSKHTIMLRDSVIQECVQFLEHCELYGRNIPA--------VIEQPLEEERMHTGKNT 644

  Fly   635 IGLEARKLRLLLIKL 649
            :..|:||||.|:.::
Mouse   645 VTYESRKLRALIYEI 659

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ttc30NP_001097155.2 TPR_2 45..75 CDD:285020 17/29 (59%)
TPR repeat 46..71 CDD:276809 15/24 (63%)
TPR_11 49..102 CDD:290150 26/52 (50%)
TPR repeat 76..117 CDD:276809 13/40 (33%)
TPR repeat 129..171 CDD:276809 19/52 (37%)
TPR_11 143..205 CDD:290150 26/64 (41%)
TPR repeat 176..205 CDD:276809 11/28 (39%)
Ttc30bNP_082511.1 TPR 1 11..44 8/32 (25%)
PEP_TPR_lipo 15..>216 CDD:274350 80/203 (39%)
TPR repeat 44..74 CDD:276809 18/29 (62%)
TPR 2 45..78 20/32 (63%)
TPR repeat 113..140 CDD:276809 14/28 (50%)
TPR 3 153..186 14/33 (42%)
TPR repeat 157..181 CDD:276809 11/24 (46%)
TPR repeat 186..220 CDD:276809 14/33 (42%)
TPR 4 188..220 13/31 (42%)
TPR repeat 250..273 CDD:276809 13/22 (59%)
TPR 5 385..418 9/32 (28%)
TPR 6 423..456 13/32 (41%)
TPR repeat 425..451 CDD:276809 9/25 (36%)
TPR repeat 456..487 CDD:276809 19/30 (63%)
TPR 7 458..491 19/32 (59%)
TPR repeat 497..522 CDD:276809 22/24 (92%)
TPR 8 543..576 21/33 (64%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C167833636
Domainoid 1 1.000 422 1.000 Domainoid score I631
eggNOG 1 0.900 - - E1_KOG4340
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H71716
Inparanoid 1 1.050 566 1.000 Inparanoid score I1072
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG56317
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0004420
OrthoInspector 1 1.000 - - otm42491
orthoMCL 1 0.900 - - OOG6_103666
Panther 1 1.100 - - O PTHR20931
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R2861
SonicParanoid 1 1.000 - - X3134
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
1514.790

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