DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ttc30 and Ttc30a

DIOPT Version :9

Sequence 1:NP_001097155.2 Gene:Ttc30 / 34702 FlyBaseID:FBgn0032470 Length:655 Species:Drosophila melanogaster
Sequence 2:NP_001258423.1 Gene:Ttc30a / 100362431 RGDID:2318157 Length:664 Species:Rattus norvegicus


Alignment Length:664 Identity:304/664 - (45%)
Similarity:425/664 - (64%) Gaps:39/664 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly    10 EGHVTRTIYNLIKDKRYEDVIECITS-FGEAANTRAGLSTLGHCYYHAQKYEEAATCYEQLCQLA 73
            :|..|..:|.||:|.||.:.::.::: ...:..:|||||.|.:|||..|::|.||.|||||.|:.
  Rat    11 DGEFTAVVYRLIRDSRYSEAVQLLSAELQGSPRSRAGLSLLAYCYYRLQEFELAAECYEQLSQMH 75

  Fly    74 PKEAKYRFYYAQSLYQAGIFADALRVLKQMGDQEDELREQCLQLQSAILYSSEDFAGAQSLLNQR 138
            |:..:||.|.||:||:|.::.:|.||...:.:...:.|  .|:||:||.||..|..||:||:.|.
  Rat    76 PELEQYRLYQAQALYKACLYPEATRVAFLLDNPTYQTR--VLRLQAAIKYSEGDLPGARSLVEQL 138

  Fly   139 AGGTA----------DTLNDEGCLLFQADQHEAAVQRFQAALQVGGFNPLVAYNVALAHFQKKQR 193
            ..|.|          |.|.:.||||::...:|||..:|.||||..|:.|.::||:|||::..:|.
  Rat   139 LSGEAGEDSGGENDPDGLVNMGCLLYKEGHYEAACSKFLAALQASGYQPDLSYNLALAYYSSRQY 203

  Fly   194 AQALDYTSEIVERGMRNHPELGIGAQMDIPDGGARSVGNPITMAISGITQALNLKAAIEFQDGNE 258
            |.||.:.::|:|||:|.|||||:|  |.|.....|||||...:..:.:.:|.|||||||:|..|.
  Rat   204 APALKHIADIIERGIRQHPELGVG--MTIEGIDIRSVGNTAVLHQTALIEAFNLKAAIEYQLRNF 266

  Fly   259 EAARDALLDLPPRAESELDPVTLHNMALTDVEG-PVAGLRKLAFLLELGAPSCPKETFANILLIC 322
            |.|::.|.|:|||||.|||||||||.||.:::. |..|..||.|||:..  ..|.|||.|:||:.
  Rat   267 EVAQETLTDMPPRAEEELDPVTLHNQALMNMDAKPTEGFEKLQFLLQQN--PFPPETFGNLLLLY 329

  Fly   323 CKNELYETAADILAEHTDLTYKYLSQYLYELLDSLITAQTSAELAEKKLGTLASSLAGKLRSLAA 387
            ||.|.::.|||:|||:..||||:|:.|||:.||::||.||:.|.|..||..||..|..:||.|..
  Rat   330 CKYEYFDLAADVLAENAHLTYKFLTPYLYDFLDAMITCQTAPEEAFIKLDGLAGMLTDQLRRLTK 394

  Fly   388 KVQEVRATNEQQALRDALKDYEQALELYLPVVMARAWISWRDDDFVGAEREFHASAEFCSENSIW 452
            :|||.|...:.:.::.|:.:|::.||.|:||:||:|.|.|..:::...|:.|..|.|||:::.:|
  Rat   395 QVQEARHNRDDEIIKKAVNEYDETLEKYIPVLMAQAKIYWNLENYQMVEKIFRKSVEFCNDHDVW 459

  Fly   453 RLNAGHVLFMQGDKYNEAAAFYEPIVRQHSDDIMSVSAAVLANLCVSYIMTFQNEEAEELMRKVE 517
            :||..||||||.:||.||..||||||:::.|:|:.|||.||||||||||||.|||||||||||:|
  Rat   460 KLNVAHVLFMQENKYKEAIGFYEPIVKKNYDNILGVSAIVLANLCVSYIMTSQNEEAEELMRKIE 524

  Fly   518 KAEEMKG--NLGKQYHHLCIVNLVVGTLYCAKSNYEFGLSRIAHALESGSGNRLYADTWLHVKHC 580
            |.||...  :..|:.:||||||||:|||||||.||:||:||:..:||. ...:|..|||.:.|.|
  Rat   525 KEEEQLSYEDPDKKIYHLCIVNLVIGTLYCAKGNYDFGISRVIKSLEP-YHKKLGTDTWYYAKRC 588

  Fly   581 ILGLLTGMAKQNIILPYATVQEVLNFLRFCESYGLFTPANIFSATEQVPEEPL----------TI 635
            .|.||..|:|..|:|....|||.:.||..||.:|...||        |.|:||          |:
  Rat   589 FLSLLENMSKHMIVLCDGVVQECVQFLEHCEIFGRNIPA--------VLEQPLEEERIHTGKNTV 645

  Fly   636 GLEARKLRLLLIKL 649
            ..|:|.|:.|:.::
  Rat   646 TYESRLLKALIYEI 659

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ttc30NP_001097155.2 TPR_2 45..75 CDD:285020 17/29 (59%)
TPR repeat 46..71 CDD:276809 15/24 (63%)
TPR_11 49..102 CDD:290150 26/52 (50%)
TPR repeat 76..117 CDD:276809 13/40 (33%)
TPR repeat 129..171 CDD:276809 19/51 (37%)
TPR_11 143..205 CDD:290150 27/71 (38%)
TPR repeat 176..205 CDD:276809 11/28 (39%)
Ttc30aNP_001258423.1 TPR_19 21..87 CDD:291240 28/65 (43%)
TPR repeat 44..74 CDD:276809 18/29 (62%)
TPR repeat 113..140 CDD:276809 14/28 (50%)
TPR_11 152..215 CDD:290150 26/62 (42%)
TPR repeat 153..181 CDD:276809 12/27 (44%)
TPR repeat 425..451 CDD:276809 9/25 (36%)
TPR repeat 456..487 CDD:276809 19/30 (63%)
TPR repeat 497..522 CDD:276809 22/24 (92%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D219475at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.010

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