DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG9932 and CG17829

DIOPT Version :9

Sequence 1:NP_609599.1 Gene:CG9932 / 34701 FlyBaseID:FBgn0262160 Length:2171 Species:Drosophila melanogaster
Sequence 2:NP_652054.1 Gene:CG17829 / 47718 FlyBaseID:FBgn0025635 Length:467 Species:Drosophila melanogaster


Alignment Length:486 Identity:105/486 - (21%)
Similarity:158/486 - (32%) Gaps:155/486 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly   601 KLKTGAQHENLVC---QCGHVAKCLSESIIHGK-SCHASAVIIDEDEAGLHED---------DGD 652
            |.|..|:.| |.|   .|..:  |..|..::|. ..|.......:|:.|.|.:         ..|
  Fly    16 KRKKPAELE-LTCGWRDCQEI--CTGEWSLNGHIGDHLEHYAKAQDDRGAHAEHTEHQCTWNSCD 77

  Fly   653 DRLEIDEDDEDHHSHSA--LNLSVTGSTRCQHCRH----RCKSSTDLMHHLKQCVEAIRC----- 706
            .|.|...:.|.|..:..  |||.:.|...|.  .|    .|.:...||..|....:..||     
  Fly    78 FRTENQVEFERHSYYHGYYLNLLLQGKLECD--LHPEIPACTAPARLMEKLPALGQNFRCGWTDC 140

  Fly   707 -----------------ANEMYDSNSGESGDRRPDSQSLQQQAAVQQQRVCIW------------ 742
                             |...||...... |.||             :.:|.|            
  Fly   141 EREFVSIVEFQDHIVKHALFEYDIQKTPE-DERP-------------KTMCNWAMCHKHMGNKYR 191

  Fly   743 ---------NKATKEIIAAAAASLQQDKNN--HNLVKSPTGSQAASNEENSYYGVETAPGYGEVT 796
                     ||  |::.......|.:.|..  .:|.:.|      .|..||:...:....:  .|
  Fly   192 LIEHISTHSNK--KQVACFHCGELFRTKTTLFDHLRRQP------ENNTNSFQCAQCFKFF--AT 246

  Fly   797 KKMTPEEEAANSSLKKVYKCPHCSFWASTASRFHVHI-VGHLNKKPFECSLCSYRSNWRWDITKH 860
            ||:.......:.:   .|||..|....|:||....|| ..||..||.:||.|..|.....|:.||
  Fly   247 KKLLKSHVVRHVN---CYKCTMCDMTCSSASSLTTHIRYRHLKDKPLKCSECDTRCVRESDLAKH 308

  Fly   861 IRL---KTIRDPSHKTAKVLMNDETGRR--------------------NYTKYNKYIT--LMKV- 899
            :::   ||:....|......:...|..|                    .:.|..|.::  |||. 
  Fly   309 VQIVHSKTVHQCEHPDCHYSVRTYTQMRRHFLEVHGNNPILYACHCCERFFKSGKSLSAHLMKKH 373

  Fly   900 --------------TEEDGDPKL----MKSGEMTPNQVASLAFLKDYAKVGSVSGQDITLEP--- 943
                          .:|:|..:|    ::|.|:| .|:.|.......||.|:.|..:| ::|   
  Fly   374 GFRLPSGHKRFTYRVDENGFYRLETTRLESLEVT-QQILSPQVNDSLAKPGTGSCYEI-VDPTNT 436

  Fly   944 -----VLPNKPNVLDDAHL-ADNLIRIPLLA 968
                 ::.|.||   :|.| .:.:|.:|.||
  Fly   437 EFERIIVSNDPN---EAQLMGEVVISLPSLA 464

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG9932NP_609599.1 C2H2 Zn finger 339..359 CDD:275368
C2H2 Zn finger 366..386 CDD:275368
C2H2 Zn finger 394..414 CDD:275368
C2H2 Zn finger 816..836 CDD:275370 7/20 (35%)
C2H2 Zn finger 844..862 CDD:275370 7/17 (41%)
CG17829NP_652054.1 C2H2 Zn finger 182..199 CDD:275368 0/16 (0%)
C2H2 Zn finger 207..225 CDD:275368 2/17 (12%)
C2H2 Zn finger 237..257 CDD:275368 3/21 (14%)
C2H2 Zn finger 263..284 CDD:275368 7/20 (35%)
C2H2 Zn finger 292..311 CDD:275368 7/18 (39%)
C2H2 Zn finger 352..373 CDD:275368 5/20 (25%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45444654
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
10.930

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