DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG9932 and CG4707

DIOPT Version :10

Sequence 1:NP_609599.1 Gene:CG9932 / 34701 FlyBaseID:FBgn0262160 Length:2171 Species:Drosophila melanogaster
Sequence 2:NP_611944.1 Gene:CG4707 / 37935 FlyBaseID:FBgn0035036 Length:673 Species:Drosophila melanogaster


Alignment Length:406 Identity:86/406 - (21%)
Similarity:146/406 - (35%) Gaps:93/406 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly    43 TSNSTSNTPVAQAGSSL-----LERHVE---RFRLQQLLQQQRQAAAVVAVVNSVQQQQQQQPQQ 99
            :|:|:|.:....:..||     .||:.|   |..::....::|:...|..|..|.::.::::.||
  Fly   254 SSSSSSESSGEDSDHSLPDIEPEERYAEIPKRVVVKPKKYRKREKPLVPPVRLSREEIERRKLQQ 318

  Fly   100 VGMDAKEEGLPQCKIKRNYSCNHCAYFTQNPRYHLTHLRDVHGEKIVINKCKLCLYASRHFQKLV 164
               |..:|.:.|             :|.:.|                   |.||....::|..:.
  Fly   319 ---DEYDEIILQ-------------FFKKFP-------------------CSLCNLLVQNFADMR 348

  Fly   165 RHMKMVHGCTDGIPSGHGQARGKRGMSREARKRRLEESVGVMGGQSLTVTVPDVPTLEQVKRELL 229
            ||.::.|    .|.||:.:..|::...|:|    |.|.|       |....||.....|..|  :
  Fly   349 RHQRVSH----NIESGYIECCGRKFHLRKA----LAEHV-------LVHKNPDHFMCSQCGR--V 396

  Fly   230 LQEEKLQRDIQAFNQRQREEQQREQQRELELVATSAYERQM--QVLRDYERQSPAEPPTPSPTSG 292
            .|:   .|.::...|.....:.:.:.:|..:.......:..  :...:|...|...|.:....| 
  Fly   397 FQD---SRALEVHEQTHTNPEVKAEPKEKRIYQCEKCPKSFTTKAAMEYHDVSKHVPKSEFKYS- 457

  Fly   293 SATPPSNGEEPQNRLLK--------------CSACEFTTLYRTQLRAHELAEHG-----KTKFFR 338
              .|..|.:.|..|.||              |..|..|...:|.|:.|...||.     |....:
  Fly   458 --CPECNKKIPTERKLKEHLRYMHDPEAAIICDKCGKTLRSQTNLKKHHELEHSEKPRPKPDPVQ 520

  Fly   339 CDKC-SYVTHIKARFSKHVK-YHSMP--MIKCVTCDFRTPYKWNLDRHM-KNHGGAGAFKCAACD 398
            |:.| :::.|:.. ..:|:| .|..|  ..:|..|:..:.....|.||: .||.....|||..|:
  Fly   521 CEICGTWLRHLSG-LKQHMKTVHEPPGDEHRCHICNKTSTNSRALKRHIYHNHLCERKFKCGMCE 584

  Fly   399 FTADIKQSLTVHEMNH 414
            ......|.|..|...|
  Fly   585 KAFKRPQDLREHTSTH 600

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG9932NP_609599.1 C2H2 Zn finger 339..359 CDD:275368 5/21 (24%)
C2H2 Zn finger 366..386 CDD:275368 5/20 (25%)
C2H2 Zn finger 394..414 CDD:275368 5/19 (26%)
C2H2 Zn finger 816..836 CDD:275370
C2H2 Zn finger 844..862 CDD:275370
CG4707NP_611944.1 zf-AD 3..77 CDD:462262
C2H2 Zn finger 334..355 CDD:275368 6/20 (30%)
LIM <361..407 CDD:413332 13/61 (21%)
C2H2 Zn finger 365..382 CDD:275368 7/27 (26%)
C2H2 Zn finger 390..410 CDD:275368 5/24 (21%)
C2H2 Zn finger 427..443 CDD:275368 0/15 (0%)
COG5236 <455..>574 CDD:227561 30/122 (25%)
C2H2 Zn finger 458..476 CDD:275368 6/17 (35%)
C2H2 Zn finger 487..507 CDD:275368 6/19 (32%)
C2H2 Zn finger 521..540 CDD:275368 4/19 (21%)
C2H2 Zn finger 551..572 CDD:275368 5/20 (25%)
C2H2 Zn finger 580..600 CDD:275368 5/19 (26%)
C2H2 Zn finger 608..629 CDD:275368
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.