DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG9932 and CG4282

DIOPT Version :10

Sequence 1:NP_609599.1 Gene:CG9932 / 34701 FlyBaseID:FBgn0262160 Length:2171 Species:Drosophila melanogaster
Sequence 2:NP_611118.3 Gene:CG4282 / 36825 FlyBaseID:FBgn0034114 Length:652 Species:Drosophila melanogaster


Alignment Length:378 Identity:77/378 - (20%)
Similarity:128/378 - (33%) Gaps:115/378 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly    89 VQQQQQQQPQQVGMDAK--EEGLPQCKIKRNYSCNHCAY-FTQNPRYH-LTH------------- 136
            ::|:::||.:...:.||  ...|| |.|     ||...: ||:..|:| |||             
  Fly   306 LEQRKKQQEEYDVIIAKFFTSVLP-CAI-----CNLLVHNFTEMQRHHRLTHQVDPGYMMCCGRK 364

  Fly   137 --LRDVHGEKIVIN------KCKLC---LYASRHFQKLVR-HM----KMVHGCTDGIPSGHGQAR 185
              .|.|..|.::::      ||.:|   ...|||.:...: ||    |:...|         ...
  Fly   365 FTQRKVLAEHVLVHWNPDHFKCSVCEKSFQNSRHLESHQQVHMDPAVKLTFSC---------DLC 420

  Fly   186 GKRGMSREARKRRLEESVGVMGGQSLTVTVPDVP---TLEQVKRELLLQEEKLQRDIQAFNQRQR 247
            .|..:|:.|           :....|...||...   |..:..:: .|.|.||:..:.:.:..: 
  Fly   421 SKTFLSKTA-----------IDYHKLNKHVPKSEFKFTCSECNKK-FLTERKLKNHMSSMHDPE- 472

  Fly   248 EEQQREQQRELELVATSAYERQMQ---VLRDYERQSPAEPPTPSPTSGSATPPSNGEEPQNRLLK 309
                       ..:......:||:   :|:.::....::.|.|.|                .|.:
  Fly   473 -----------STIICDKCGKQMRTKIILKKHQELMHSDKPRPEP----------------ELQQ 510

  Fly   310 CSACEFTTLYRTQLRAH-------ELAEHGKTKFFRCDKCSYVTHIKARFSKHVKYHSMP---MI 364
            |..|.......|.|:.|       ...||      ||..|:.|:.......:|: ||:..   ..
  Fly   511 CQICGAWLKGMTGLKQHMKSIHVESAGEH------RCHICAKVSPNARALRRHI-YHNHECERKF 568

  Fly   365 KCVTCD--FRTPYKWNLDRHMKNHGGAGAFKCAACDFTADIKQSLTVHEMNHH 415
            ||..|:  |:.|.:  |..|...|.|...:.|..|..|.....::..|....|
  Fly   569 KCTMCEKAFKRPQE--LKEHTSTHTGEVLYTCPNCPMTFFCSANMYKHRQRLH 619

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG9932NP_609599.1 C2H2 Zn finger 339..359 CDD:275368 4/19 (21%)
C2H2 Zn finger 366..386 CDD:275368 6/21 (29%)
C2H2 Zn finger 394..414 CDD:275368 4/19 (21%)
C2H2 Zn finger 816..836 CDD:275370
C2H2 Zn finger 844..862 CDD:275370
CG4282NP_611118.3 zf-AD 7..82 CDD:462262
PLN03237 <81..239 CDD:215641
C2H2 Zn finger 330..351 CDD:275368 9/25 (36%)
C2H2 Zn finger 360..378 CDD:275368 3/17 (18%)
LIM 361..>400 CDD:413332 9/38 (24%)
C2H2 Zn finger 386..406 CDD:275368 5/19 (26%)
C2H2 Zn finger 417..438 CDD:275368 5/40 (13%)
C2H2 Zn finger 448..465 CDD:275368 4/17 (24%)
C2H2 Zn finger 477..498 CDD:275368 3/20 (15%)
C2H2 Zn finger 511..532 CDD:275368 5/20 (25%)
C2H2 Zn finger 541..562 CDD:275368 6/21 (29%)
C2H2 Zn finger 570..590 CDD:275368 6/21 (29%)
C2H2 Zn finger 598..619 CDD:275368 4/20 (20%)
Blue background indicates that the domain is not in the aligned region.

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