DRSC/TRiP Functional Genomics Resources

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Protein Alignment APOD and GLaz

DIOPT Version :10

Sequence 1:NP_001638.1 Gene:APOD / 347 HGNCID:612 Length:189 Species:Homo sapiens
Sequence 2:NP_523727.2 Gene:GLaz / 36447 FlyBaseID:FBgn0033799 Length:212 Species:Drosophila melanogaster


Alignment Length:207 Identity:62/207 - (29%)
Similarity:101/207 - (48%) Gaps:28/207 - (13%)


- Green bases have known domain annotations that are detailed below.


Human     2 VMLL--LLLSALAGLFGAAEGQAFHLGKCPNPPVQENFDVNKYLGRWYEIEK---IP------TT 55
            |.||  :||...||.      .|:..|:|||.|....|::::.||.|||:|:   :|      ||
  Fly    11 VWLLSGVLLVTFAGT------DAYGFGRCPNYPSMPKFNMSRVLGHWYEVERSFYLPEIASGCTT 69

Human    56 FENGRCIQANYSLMENGKIKVLNQEL-RADGTVNQIEGEATPVNLTEPAKLEVKFSWFMP----- 114
            |:.....:...|...|.|:.|..:.: |..|..|...|.|||.| :..:.::.||:...|     
  Fly    70 FQFEPYNKGEQSKFSNFKLAVAIKNINRITGNPNVNIGYATPEN-SRSSIMDFKFTTRFPDVIAR 133

Human   115 ----SAPYWILATDYENYALVYSCTCIIQLFHVDFAWILARNPNLPPETVDSLKNILTSNNIDVK 175
                |..|.:|.|||||:|:::||..|..|.|.|..|||.|:.:...:....:.::|...::|.:
  Fly   134 LLPGSGKYQVLYTDYENFAILWSCGSIGSLGHSDQIWILGRDRDFEVDIRSKVYDVLKRLSLDPE 198

Human   176 KMTVTDQVNCPK 187
            ::.::....||:
  Fly   199 RLIISKNKQCPE 210

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
APODNP_001638.1 lipocalin_apoD-like 25..182 CDD:381212 52/175 (30%)
GLazNP_523727.2 lipocalin_FABP 30..204 CDD:471979 52/174 (30%)

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